Os10g0390000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0390000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 254.8 | 0.75 | 4.02 | -2.24 | 0.869 | 1.63 | -0.218 | -6.26 | -0.836 | 4.53 | 23.1 | 1024 | -- | -- |
| 273.39 | 0.77 | 3.85 | -0.728 | 0.733 | 1.03 | -0.772 | -- | -0.432 | 3.65 | 23.98 | 1214 | -- | -- |
| 254.89 | 0.744 | 4.03 | -2.27 | 0.864 | 1.65 | -- | -6.39 | -0.84 | 4.58 | 23.21 | 1029 | -- | -- |
| 274.35 | 0.771 | 3.82 | -0.657 | 0.816 | 0.953 | -- | -- | -0.31 | 3.7 | 25.22 | 1223 | -- | -- |
| 289.71 | 0.793 | 4.04 | -2.38 | -- | 1.82 | -- | -6.55 | -0.823 | -- | 23.9 | 1152 | -- | -- |
| 305.21 | 0.819 | 3.8 | -0.377 | 0.959 | -- | -0.771 | -- | -0.216 | 3.11 | -- | -- | -- | -- |
| 307.07 | 0.821 | 3.8 | -0.361 | 0.961 | -- | -- | -- | -0.212 | 3.28 | -- | -- | -- | -- |
| 309.19 | 0.819 | 3.84 | -0.696 | -- | 1.19 | -- | -- | -0.354 | -- | 24.4 | 1197 | -- | -- |
| 284.74 | 0.786 | 3.79 | -- | 0.84 | 0.782 | -- | -- | -0.165 | 3.61 | 26.56 | 1225 | -- | -- |
| 359.32 | 0.886 | 3.8 | -0.321 | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
| 310.51 | 0.824 | 3.79 | -- | 0.954 | -- | -- | -- | -0.171 | 3.28 | -- | -- | -- | -- |
| 321.06 | 0.835 | 3.81 | -- | -- | 1.04 | -- | -- | -0.246 | -- | 24.7 | 1194 | -- | -- |
| 362.03 | 0.888 | 3.79 | -- | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 251.04 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 3 | 251.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 9 | 252.49 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 38 | 255.74 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 66 | 256.84 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 70 | 257.05 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 85 | 257.78 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 94 | 258.14 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 142 | 259.11 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 167 | 260.21 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 169 | 260.24 | wind | 1 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 174 | 260.35 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 182 | 260.49 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 183 | 260.54 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 10 |
| 193 | 261.00 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 7 |
| 199 | 261.05 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 241 | 261.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 281 | 261.93 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 2 |
| 289 | 261.98 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 12 |
| 397 | 262.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 444 | 262.91 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 446 | 262.92 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 459 | 262.93 | temperature | 25 | 720 | > th | dose independent | sin | 18 | NA |
| 466 | 262.95 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 509 | 263.11 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 2 |
| 521 | 263.12 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 553 | 263.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 594 | 263.37 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 603 | 263.41 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 611 | 263.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 618 | 263.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 677 | 263.85 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 738 | 264.18 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 8 |
| 818 | 264.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 841 | 264.77 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 861 | 264.86 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 16 |
| 939 | 265.20 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 966 | 265.26 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 8 |