Os10g0388500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0388500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.92 | 0.27 | 8.99 | -0.109 | 0.493 | 0.0142 | -0.515 | 1.67 | 0.474 | 6.01 | 0.2252 | 4803 | -- | -- |
| 33.55 | 0.27 | 9.02 | -0.148 | 0.49 | 0.444 | -0.516 | -- | 0.488 | 6.02 | 0.5 | 2599 | -- | -- |
| 33.55 | 0.27 | 8.99 | -0.113 | 0.492 | 0.0198 | -- | 1.62 | 0.476 | 5.86 | 0.2141 | 4802 | -- | -- |
| 34.14 | 0.272 | 9.02 | -0.15 | 0.49 | 0.442 | -- | -- | 0.488 | 5.88 | 0.5 | 2397 | -- | -- |
| 45.94 | 0.316 | 9 | -0.115 | -- | 0.0193 | -- | 1.71 | 0.48 | -- | 0.188 | 5570 | -- | -- |
| 37.17 | 0.286 | 9.03 | -0.0216 | 0.497 | -- | -0.458 | -- | 0.459 | 5.93 | -- | -- | -- | -- |
| 37.65 | 0.287 | 9.03 | -0.026 | 0.495 | -- | -- | -- | 0.461 | 5.75 | -- | -- | -- | -- |
| 46.57 | 0.318 | 9.03 | -0.14 | -- | 0.451 | -- | -- | 0.5 | -- | 0.5 | 2642 | -- | -- |
| 34.66 | 0.274 | 9.02 | -- | 0.49 | 0.391 | -- | -- | 0.499 | 5.88 | 0.5 | 2401 | -- | -- |
| 50.36 | 0.332 | 9.04 | -0.0105 | -- | -- | -- | -- | 0.472 | -- | -- | -- | -- | -- |
| 37.67 | 0.287 | 9.03 | -- | 0.495 | -- | -- | -- | 0.464 | 5.76 | -- | -- | -- | -- |
| 47.05 | 0.319 | 9.03 | -- | -- | 0.399 | -- | -- | 0.509 | -- | 0.5 | 2599 | -- | -- |
| 50.36 | 0.331 | 9.04 | -- | -- | -- | -- | -- | 0.474 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 2 | 30.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 3 | 30.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 4 | 30.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 13 | 31.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 14 | 31.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 15 | 31.17 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 16 | 31.18 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 19 | 31.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 22 | 31.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 23 | 31.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 33 | 31.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 52 | 31.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 54 | 31.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 103 | 31.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 105 | 31.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 114 | 31.79 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 115 | 31.79 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 182 | 31.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 185 | 31.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 187 | 31.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 200 | 31.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 219 | 31.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 223 | 31.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 225 | 31.99 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 228 | 31.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 233 | 31.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 237 | 32.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 260 | 32.03 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 265 | 32.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 283 | 32.07 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 287 | 32.07 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 294 | 32.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 300 | 32.09 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 335 | 32.13 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 345 | 32.15 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 355 | 32.16 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 387 | 32.20 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 400 | 32.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 418 | 32.25 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 421 | 32.25 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 424 | 32.25 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 439 | 32.28 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 482 | 32.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 484 | 32.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 490 | 32.33 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 513 | 32.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 525 | 32.37 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 529 | 32.37 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 561 | 32.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 610 | 32.44 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 628 | 32.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 648 | 32.47 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 666 | 32.48 | humidity | 50.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 674 | 32.48 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 685 | 32.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 695 | 32.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 696 | 32.49 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 718 | 32.50 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 724 | 32.51 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 22 |
| 733 | 32.51 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 763 | 32.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 782 | 32.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 783 | 32.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 791 | 32.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 797 | 32.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 798 | 32.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 812 | 32.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 819 | 32.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 861 | 32.59 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 957 | 32.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 20 |