Os10g0382600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0382600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.54 | 0.496 | 5.96 | 2.05 | 0.377 | -1.58 | 0.268 | 5.36 | 0.0684 | 16.9 | 26.31 | 1087 | -- | -- |
| 117.85 | 0.506 | 6.09 | 0.946 | 0.38 | -1.08 | 0.411 | -- | -0.122 | 17.2 | 25.73 | 1058 | -- | -- |
| 111.66 | 0.492 | 5.95 | 2.11 | 0.37 | -1.59 | -- | 5.64 | 0.061 | 16.8 | 26.54 | 1102 | -- | -- |
| 117.63 | 0.505 | 6.1 | 0.936 | 0.334 | -1.01 | -- | -- | -0.154 | 16.3 | 26.12 | 1122 | -- | -- |
| 118.01 | 0.506 | 5.95 | 2.09 | -- | -1.57 | -- | 5.13 | 0.0661 | -- | 26.35 | 1161 | -- | -- |
| 151.91 | 0.578 | 6.1 | 0.644 | 0.462 | -- | 0.267 | -- | -0.202 | 14.8 | -- | -- | -- | -- |
| 152.16 | 0.578 | 6.1 | 0.65 | 0.462 | -- | -- | -- | -0.2 | 14.7 | -- | -- | -- | -- |
| 123.16 | 0.517 | 6.08 | 0.949 | -- | -1.05 | -- | -- | -0.131 | -- | 25.65 | 1166 | -- | -- |
| 138.98 | 0.549 | 6.13 | -- | 0.34 | -0.765 | -- | -- | -0.323 | 15.7 | 27.52 | 1151 | -- | -- |
| 164.59 | 0.599 | 6.1 | 0.63 | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
| 163.29 | 0.598 | 6.12 | -- | 0.45 | -- | -- | -- | -0.272 | 14.7 | -- | -- | -- | -- |
| 145.18 | 0.561 | 6.13 | -- | -- | -0.825 | -- | -- | -0.319 | -- | 27.24 | 1167 | -- | -- |
| 175.06 | 0.618 | 6.12 | -- | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 2 | 112.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 16 | 114.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 15 |
| 20 | 114.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 39 | 115.13 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 45 | 115.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 49 | 115.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 59 | 115.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 64 | 116.02 | temperature | 15 | 90 | > th | dose dependent | sin | 16 | NA |
| 66 | 116.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 94 | 116.61 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 98 | 116.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 99 | 116.66 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 100 | 116.66 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 136 | 117.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 149 | 117.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 171 | 117.42 | temperature | 10 | 90 | > th | dose dependent | rect. | 2 | 19 |
| 172 | 117.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 189 | 117.55 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 193 | 117.59 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 294 | 118.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 317 | 118.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 349 | 118.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 361 | 118.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 446 | 118.75 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 470 | 118.81 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 471 | 118.81 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 479 | 118.83 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 543 | 119.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 572 | 119.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 634 | 119.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 856 | 119.85 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 864 | 119.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 876 | 119.91 | temperature | 30 | 10 | < th | dose dependent | sin | 15 | NA |
| 1000 | 120.12 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |