Os10g0382400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0382400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.06 | 0.326 | 11.4 | -0.877 | 0.207 | -1.24 | -1.01 | -1.28 | 0.134 | 16.5 | 23.24 | 71 | -- | -- |
| 50.03 | 0.329 | 11.5 | -1.02 | 0.222 | -1.04 | -0.701 | -- | 0.0946 | 17 | 23.61 | 70 | -- | -- |
| 50.39 | 0.331 | 11.4 | -0.945 | 0.203 | -1.2 | -- | -0.789 | 0.114 | 17 | 23.24 | 73 | -- | -- |
| 51.3 | 0.334 | 11.5 | -1.03 | 0.214 | -1.05 | -- | -- | 0.0946 | 16.9 | 23.58 | 80 | -- | -- |
| 52.48 | 0.337 | 11.4 | -0.945 | -- | -1.19 | -- | -0.835 | 0.0939 | -- | 23.6 | 111 | -- | -- |
| 64.52 | 0.377 | 11.4 | -0.785 | 0.33 | -- | -0.645 | -- | 0.253 | 15.8 | -- | -- | -- | -- |
| 65.71 | 0.38 | 11.4 | -0.794 | 0.325 | -- | -- | -- | 0.249 | 15.5 | -- | -- | -- | -- |
| 53.31 | 0.34 | 11.5 | -1.06 | -- | -1.07 | -- | -- | 0.0435 | -- | 24.77 | 109 | -- | -- |
| 76.6 | 0.41 | 11.4 | -- | 0.274 | -0.632 | -- | -- | 0.262 | 16.4 | 23.43 | 71 | -- | -- |
| 71.63 | 0.395 | 11.4 | -0.808 | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
| 82.33 | 0.424 | 11.4 | -- | 0.341 | -- | -- | -- | 0.337 | 15.5 | -- | -- | -- | -- |
| 80.31 | 0.417 | 11.4 | -- | -- | -0.683 | -- | -- | 0.212 | -- | 25.25 | 69 | -- | -- |
| 88.84 | 0.44 | 11.4 | -- | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.49 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 20 |
| 2 | 47.55 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 16 |
| 10 | 48.34 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 14 | 48.46 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 16 |
| 27 | 48.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 29 | 48.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 31 | 48.91 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 33 | 48.98 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 38 | 49.07 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 39 | 49.09 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 42 | 49.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 44 | 49.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 51 | 49.18 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 59 | 49.24 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 20 |
| 66 | 49.27 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 18 |
| 76 | 49.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 82 | 49.39 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 20 |
| 104 | 49.54 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 18 |
| 168 | 49.91 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 169 | 49.92 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 9 |
| 198 | 50.10 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 22 |
| 199 | 50.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 240 | 50.34 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 271 | 50.45 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 21 |
| 274 | 50.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 300 | 50.56 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 343 | 50.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 13 |
| 415 | 50.98 | temperature | 10 | 90 | > th | dose dependent | sin | 8 | NA |
| 424 | 51.00 | temperature | 25 | 270 | < th | dose dependent | sin | 11 | NA |
| 456 | 51.13 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 19 |
| 569 | 51.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 16 |
| 595 | 51.64 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 23 |
| 636 | 51.79 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 673 | 51.92 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 21 |
| 699 | 52.01 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 720 | 52.08 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 721 | 52.09 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 8 |
| 744 | 52.15 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 20 |
| 768 | 52.19 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 22 |
| 775 | 52.21 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 23 |
| 819 | 52.29 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 21 |
| 822 | 52.30 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 17 |
| 849 | 52.34 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 851 | 52.34 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 852 | 52.34 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 859 | 52.36 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 860 | 52.36 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 862 | 52.36 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 23 |
| 870 | 52.38 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 875 | 52.39 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 16 |
| 877 | 52.39 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 17 |
| 886 | 52.40 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 887 | 52.40 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 904 | 52.43 | temperature | 20 | 90 | > th | dose independent | sin | 8 | NA |
| 963 | 52.51 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 1000 | 52.57 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |