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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0382100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.13 (0.0222) R2 : 0.00382
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0617 (0.0467) R2dN8 : 0.00493 R2N8 : 0.00382
σ : 0.418
deviance : 80.12
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.9 0.404 3.14 0.0264 0.104 -0.39 -0.0802 1.12 0.0627 6.72 1.194 16 -- --
75.1 0.404 3.13 0.0791 0.117 -0.307 -0.165 -- 0.0777 6.46 1.175 14 -- --
73.92 0.4 3.14 0.0244 0.104 -0.391 -- 1.13 0.0628 6.77 1.195 16 -- --
75.16 0.404 3.13 0.0806 0.118 -0.305 -- -- 0.0774 6.67 1.178 14 -- --
74.43 0.402 3.15 0.0145 -- -0.428 -- 1.17 0.0569 -- 1.1 16 -- --
77.47 0.413 3.13 0.119 0.205 -- -0.161 -- 0.07 5.57 -- -- -- --
77.53 0.412 3.13 0.119 0.205 -- -- -- 0.0707 5.62 -- -- -- --
75.81 0.406 3.13 0.073 -- -0.358 -- -- 0.0789 -- 1.182 16 -- --
75.33 0.404 3.13 -- 0.117 -0.315 -- -- 0.0687 6.69 1.153 14 -- --
79.7 0.417 3.13 0.125 -- -- -- -- 0.0756 -- -- -- -- --
77.9 0.413 3.13 -- 0.206 -- -- -- 0.0575 5.59 -- -- -- --
75.95 0.406 3.13 -- -- -0.367 -- -- 0.071 -- 1.123 16 -- --
80.12 0.418 3.13 -- -- -- -- -- 0.0617 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.94 radiation 1.0 4320 < th dose dependent rect. 3 1
2 66.99 atmosphere 995.0 30 > th dose independent rect. 3 23
3 67.00 wind 9.0 1440 < th dose independent rect. 3 1
4 67.00 temperature 10.0 1440 > th dose independent rect. 3 1
7 67.00 temperature 30.0 1440 < th dose independent rect. 3 1
11 67.00 humidity 50.0 1440 > th dose independent rect. 3 1
20 67.00 atmosphere 995.0 1440 > th dose independent rect. 3 1
21 67.00 radiation 1.0 1440 < th dose independent rect. 3 1
41 67.00 temperature 10.0 1440 > th dose independent rect. 4 23
53 67.00 radiation 40.0 43200 < th dose dependent rect. 3 1
61 67.04 temperature 20.0 30 > th dose dependent rect. 2 1
62 67.04 atmosphere 1005.0 30 > th dose dependent rect. 2 1
63 67.05 temperature 25.0 90 > th dose independent rect. 2 1
65 67.08 atmosphere 1005.0 30 > th dose independent rect. 2 1
66 67.08 wind 3.0 30 < th dose dependent rect. 2 1
71 67.10 wind 3.0 30 < th dose independent rect. 2 1
78 67.12 humidity 90.0 30 > th dose independent rect. 2 1
81 67.14 humidity 50.0 30 > th dose dependent rect. 2 1
86 67.15 temperature 10.0 30 > th dose independent rect. 2 1
88 67.15 temperature 30.0 30 < th dose independent rect. 2 1
89 67.15 humidity 50.0 30 > th dose independent rect. 2 1
93 67.15 atmosphere 1010.0 30 < th dose independent rect. 2 1
95 67.15 radiation 1.0 30 < th dose independent rect. 2 1
100 67.15 precipitation 0.1 30 < th dose independent rect. 2 1
101 67.15 temperature 10.0 30 > th dose independent rect. 3 23
102 67.15 radiation 1.0 30 < th dose dependent rect. 2 1
107 67.15 precipitation 0.1 30 < th dose dependent rect. 2 1
115 67.26 atmosphere 1015.0 30 < th dose dependent rect. 2 1
119 67.34 temperature 30.0 30 < th dose dependent rect. 2 1
127 67.43 wind 1.0 30 > th dose independent rect. 2 1
164 67.73 precipitation 0.1 30 < th dose independent rect. 3 23
171 67.73 precipitation 0.1 30 < th dose dependent rect. 3 23
181 68.75 wind 9.0 30 < th dose independent rect. 3 23
197 69.78 humidity 50.0 30 > th dose independent rect. 3 23
206 70.27 temperature 30.0 30 < th dose independent rect. 3 23
250 71.62 humidity 90.0 90 < th dose independent rect. 2 1
266 72.21 atmosphere 1015.0 30 < th dose independent rect. 3 23
292 72.83 temperature 25.0 270 > th dose independent rect. 23 4
298 72.93 wind 1.0 10 < th dose independent rect. 15 12
300 72.94 wind 1.0 10 < th dose independent rect. 17 10
307 72.96 wind 1.0 10 < th dose independent rect. 11 16
310 73.00 wind 1.0 10 > th dose independent rect. 8 23
312 73.01 radiation 10.0 30 > th dose independent rect. 7 1
328 73.20 humidity 80.0 10 < th dose independent rect. 7 1
379 73.66 wind 1.0 30 > th dose independent rect. 3 23
382 73.68 wind 1.0 10 > th dose independent sin 15 NA
402 73.74 radiation 10.0 10 < th dose dependent rect. 3 23
430 73.77 wind 1.0 10 > th dose independent rect. 21 23
453 73.79 temperature 25.0 30 > th dose independent rect. 7 1
454 73.80 wind 1.0 10 > th dose independent rect. 21 10
460 73.84 wind 3.0 30 < th dose dependent rect. 2 6
530 74.05 humidity 50.0 30 > th dose dependent rect. 3 23
546 74.11 radiation 10.0 10 > th dose independent rect. 16 16
565 74.20 precipitation 0.1 720 < th dose independent rect. 15 8
570 74.20 precipitation 0.1 720 < th dose dependent rect. 15 8
595 74.29 humidity 50.0 720 > th dose independent rect. 3 8
599 74.30 atmosphere 995.0 720 > th dose independent rect. 23 16
600 74.32 atmosphere 1015.0 1440 < th dose independent rect. 3 1
603 74.33 temperature 10.0 720 > th dose independent rect. 15 8
604 74.33 temperature 10.0 720 > th dose independent rect. 23 16
605 74.33 precipitation 0.1 720 < th dose independent rect. 15 16
608 74.33 precipitation 0.1 720 < th dose dependent rect. 15 16
625 74.43 precipitation 0.1 720 < th dose independent rect. 11 16
626 74.43 precipitation 0.1 720 < th dose dependent rect. 11 16
664 74.45 radiation 40.0 30 < th dose independent rect. 3 23
670 74.46 wind 9.0 30 < th dose dependent rect. 3 23
671 74.47 temperature 10.0 720 > th dose independent rect. 3 8
672 74.47 atmosphere 995.0 720 > th dose independent rect. 3 8
673 74.47 temperature 10.0 720 > th dose independent rect. 11 16
686 74.52 radiation 10.0 30 < th dose independent rect. 3 23
696 74.55 temperature 10.0 30 > th dose dependent rect. 3 23
708 74.62 humidity 90.0 10 > th dose independent rect. 24 3
716 74.64 atmosphere 995.0 720 > th dose independent rect. 7 8
717 74.64 wind 1.0 30 > th dose dependent rect. 2 1
720 74.65 precipitation 0.1 720 < th dose independent rect. 19 8
724 74.65 precipitation 0.1 720 < th dose dependent rect. 19 8
738 74.70 wind 9.0 720 < th dose dependent rect. 2 1
741 74.71 wind 9.0 720 < th dose independent rect. 3 8
743 74.72 wind 9.0 720 < th dose independent rect. 19 8
757 74.75 atmosphere 995.0 30 > th dose dependent rect. 3 23
760 74.78 wind 1.0 10 > th dose independent no NA NA
766 74.82 temperature 10.0 720 > th dose independent rect. 7 8
767 74.82 atmosphere 1015.0 720 < th dose independent rect. 7 8
769 74.82 temperature 10.0 720 > th dose independent rect. 15 16
770 74.82 atmosphere 995.0 720 > th dose independent rect. 15 16
785 74.86 atmosphere 995.0 720 > th dose independent rect. 3 16
793 74.90 atmosphere 1010.0 30 < th dose independent rect. 2 6
795 74.90 wind 1.0 30 < th dose dependent rect. 11 16
813 74.94 radiation 1.0 720 < th dose dependent rect. 19 8
814 74.95 temperature 10.0 720 > th dose independent rect. 19 8
815 74.95 temperature 30.0 720 < th dose independent rect. 19 8
816 74.95 humidity 50.0 720 > th dose independent rect. 19 8
817 74.95 atmosphere 995.0 720 > th dose independent rect. 19 8
818 74.95 radiation 1.0 720 < th dose independent rect. 19 8
823 74.95 wind 1.0 10 > th dose independent rect. 18 13
824 74.95 temperature 10.0 720 > th dose independent rect. 3 16
833 74.97 atmosphere 995.0 10 > th dose independent rect. 14 12
841 74.98 atmosphere 995.0 30 > th dose dependent rect. 2 6
852 75.01 wind 9.0 720 < th dose independent rect. 15 8
856 75.01 temperature 10.0 30 > th dose dependent rect. 2 6
865 75.03 wind 5.0 30 < th dose independent rect. 2 6
867 75.03 atmosphere 1000.0 30 > th dose independent rect. 8 18
877 75.05 temperature 25.0 1440 < th dose independent rect. 1 1
883 75.07 atmosphere 1005.0 30 > th dose independent rect. 2 6
889 75.08 wind 1.0 10 > th dose independent rect. 21 14
901 75.10 wind 9.0 720 < th dose independent rect. 15 12
909 75.11 wind 5.0 30 > th dose independent rect. 24 6
923 75.12 wind 5.0 10 > th dose dependent rect. 24 6
928 75.13 temperature 30.0 30 < th dose independent rect. 8 18
931 75.13 wind 5.0 30 > th dose dependent rect. 24 4
947 75.15 precipitation 0.1 720 < th dose independent rect. 15 23
950 75.15 precipitation 0.1 720 < th dose dependent rect. 15 23
960 75.17 temperature 20.0 30 > th dose dependent rect. 7 1
963 75.18 precipitation 0.1 90 > th dose independent rect. 23 2
965 75.18 atmosphere 995.0 10 > th dose independent rect. 16 10
968 75.18 precipitation 0.1 90 > th dose dependent rect. 23 2
972 75.20 wind 1.0 10 < th dose independent sin 16 NA
975 75.20 wind 1.0 10 > th dose independent rect. 13 23
980 75.21 wind 5.0 10 > th dose independent rect. 24 2