Os10g0380100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os10g0380100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1013.27 | 1.5 | 4.11 | -2.12 | 0.654 | -3.64 | -0.8 | -0.745 | -0.418 | 0.981 | 0.7391 | 1436 | 11.1 | 18.7 |
| 1013.71 | 1.48 | 4.11 | -2.02 | 0.646 | -3.54 | -0.817 | -- | -0.417 | 0.971 | 0.7323 | 1436 | 11.1 | 18.7 |
| 1015.93 | 1.48 | 4.11 | -2.1 | 0.654 | -3.67 | -- | -0.788 | -0.417 | 0.888 | 0.7355 | 1436 | 11.1 | 18.8 |
| 1016.43 | 1.48 | 4.11 | -1.99 | 0.647 | -3.58 | -- | -- | -0.405 | 0.88 | 0.73 | 1436 | 11.1 | 18.7 |
| 1029.81 | 1.49 | 4.1 | -1.96 | -- | -3.94 | -- | -0.649 | -0.401 | -- | 0.69 | 1461 | 10.8 | 19 |
| 1185.62 | 1.61 | 4.2 | -2.65 | 0.64 | -- | -1.33 | -- | -0.87 | 0.779 | -- | -- | -- | -- |
| 1193.07 | 1.62 | 4.2 | -2.6 | 0.643 | -- | -- | -- | -0.862 | 0.573 | -- | -- | -- | -- |
| 1029.2 | 1.49 | 4.1 | -1.94 | -- | -3.89 | -- | -- | -0.41 | -- | 0.6901 | 1462 | 10.6 | 19.2 |
| 1098.59 | 1.54 | 4.1 | -- | 0.674 | -4.1 | -- | -- | -0.142 | 0.762 | 0.7288 | 1431 | 11.2 | 19.4 |
| 1219 | 1.63 | 4.19 | -2.57 | -- | -- | -- | -- | -0.851 | -- | -- | -- | -- | -- |
| 1370.84 | 1.73 | 4.14 | -- | 0.605 | -- | -- | -- | -0.573 | 0.364 | -- | -- | -- | -- |
| 1107.03 | 1.55 | 4.09 | -- | -- | -4.41 | -- | -- | -0.169 | -- | 0.6824 | 1461 | 10.6 | 20 |
| 1393.84 | 1.74 | 4.12 | -- | -- | -- | -- | -- | -0.566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1022.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 3 | 1022.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 11 | 1025.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 42 | 1031.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 44 | 1031.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 12 |
| 50 | 1031.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 53 | 1031.48 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 82 | 1032.19 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 119 | 1034.25 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 123 | 1034.75 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 145 | 1036.51 | radiation | 1 | 1440 | > th | dose independent | sin | 15 | NA |
| 150 | 1036.84 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 152 | 1036.95 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 158 | 1037.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 159 | 1037.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 161 | 1037.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 162 | 1037.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 20 |
| 171 | 1037.28 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 186 | 1037.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 196 | 1037.52 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 215 | 1037.79 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 226 | 1037.80 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 246 | 1038.08 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 279 | 1039.03 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 285 | 1039.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 289 | 1039.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 12 |
| 300 | 1039.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 321 | 1039.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 323 | 1039.88 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 344 | 1040.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 347 | 1040.06 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 348 | 1040.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 352 | 1040.13 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 355 | 1040.15 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 425 | 1040.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 430 | 1040.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 457 | 1040.45 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 500 | 1040.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 527 | 1042.10 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 540 | 1042.31 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 541 | 1042.34 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 543 | 1042.37 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 600 | 1043.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 622 | 1044.04 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 624 | 1044.07 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 13 |
| 627 | 1044.37 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 630 | 1044.44 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 20 |
| 643 | 1044.77 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 650 | 1044.97 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 657 | 1045.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 665 | 1045.26 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 669 | 1045.37 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 678 | 1045.62 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 702 | 1046.60 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 19 |
| 703 | 1046.62 | wind | 9 | 14400 | < th | dose independent | sin | 1 | NA |
| 706 | 1046.70 | wind | 9 | 14400 | > th | dose independent | sin | 0 | NA |
| 718 | 1046.94 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 732 | 1047.17 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 734 | 1047.18 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 7 |
| 735 | 1047.19 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 8 |
| 759 | 1047.53 | wind | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 804 | 1048.30 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 830 | 1048.85 | wind | 9 | 14400 | > th | dose dependent | sin | 0 | NA |
| 835 | 1048.95 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 877 | 1049.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 888 | 1049.64 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 914 | 1050.24 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |