Os10g0378100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os10g0378100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.05 | 0.399 | 13 | -2.74 | 0.515 | 1.79 | -0.315 | -2.23 | -0.671 | 22.1 | 20.02 | 1423 | -- | -- |
| 73.23 | 0.399 | 12.9 | -2.45 | 0.45 | 2.11 | -0.591 | -- | -0.529 | 22 | 14.26 | 5409 | -- | -- |
| 72.41 | 0.396 | 13 | -2.74 | 0.518 | 1.78 | -- | -2.25 | -0.673 | 22.3 | 20.05 | 1430 | -- | -- |
| 73.44 | 0.399 | 12.9 | -2.53 | 0.46 | 2.18 | -- | -- | -0.559 | 22.4 | 14.51 | 5344 | -- | -- |
| 76.8 | 0.408 | 13 | -2.61 | -- | 2.17 | -- | -2.17 | -0.636 | -- | 18.35 | 959 | -- | -- |
| 162.89 | 0.598 | 12.8 | -1.45 | 0.582 | -- | -0.2 | -- | -0.091 | 22.9 | -- | -- | -- | -- |
| 163.05 | 0.598 | 12.8 | -1.44 | 0.582 | -- | -- | -- | -0.0907 | 22.9 | -- | -- | -- | -- |
| 82.11 | 0.422 | 12.9 | -2.28 | -- | 2.28 | -- | -- | -0.545 | -- | 14.04 | 2287 | -- | -- |
| 178.22 | 0.622 | 12.8 | -- | 0.394 | 1.14 | -- | -- | -0.134 | 23.1 | 21.9 | 2137 | -- | -- |
| 184.12 | 0.634 | 12.8 | -1.43 | -- | -- | -- | -- | -0.0865 | -- | -- | -- | -- | -- |
| 217.9 | 0.691 | 12.8 | -- | 0.571 | -- | -- | -- | 0.07 | 22.8 | -- | -- | -- | -- |
| 180.97 | 0.627 | 12.8 | -- | -- | 1.36 | -- | -- | -0.144 | -- | 21.3 | 932 | -- | -- |
| 238.06 | 0.72 | 12.8 | -- | -- | -- | -- | -- | 0.0721 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 3 | 71.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 19 | 71.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 37 | 71.93 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 47 | 71.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 21 |
| 98 | 72.07 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 257 | 73.22 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 331 | 73.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 354 | 73.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 427 | 73.52 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 443 | 73.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 713 | 73.82 | temperature | 30 | 4320 | < th | dose dependent | rect. | 15 | 19 |
| 776 | 73.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 784 | 73.90 | temperature | 10 | 4320 | > th | dose dependent | sin | 5 | NA |
| 950 | 74.06 | temperature | 15 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 975 | 74.09 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 994 | 74.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |