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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0377300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.19 (0.0382) R2 : 0.0188
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.237 (0.0803) R2dN8 : 0.0242 R2N8 : 0.0188
σ : 0.719
deviance : 237.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
211.63 0.683 3.19 -0.253 0.45 -0.879 0.411 1.24 0.259 19.3 73.99 829 -- --
213.52 0.681 3.2 -0.349 0.481 -0.912 0.915 -- 0.237 19.4 74.76 820 -- --
211.96 0.678 3.18 -0.241 0.446 -0.876 -- 1.5 0.264 19.4 73.97 829 -- --
215.77 0.684 3.2 -0.373 0.467 -0.884 -- -- 0.238 19.3 74.63 820 -- --
217.71 0.687 3.17 -0.259 -- -0.55 -- 1.37 0.264 -- 73.15 949 -- --
228.95 0.709 3.19 -0.449 0.143 -- -0.462 -- 0.189 11.8 -- -- -- --
229.44 0.709 3.2 -0.465 0.171 -- -- -- 0.189 14 -- -- -- --
221.21 0.693 3.18 -0.392 -- -0.692 -- -- 0.241 -- 75.44 1101 -- --
219.37 0.69 3.19 -- 0.499 -0.941 -- -- 0.281 19.3 75 820 -- --
231.19 0.71 3.2 -0.472 -- -- -- -- 0.185 -- -- -- -- --
235.13 0.717 3.18 -- 0.179 -- -- -- 0.241 14 -- -- -- --
225.08 0.699 3.17 -- -- -0.606 -- -- 0.297 -- 74.5 1103 -- --
237.07 0.719 3.19 -- -- -- -- -- 0.237 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 203.78 humidity 80.0 270 > th dose independent rect. 4 16
7 205.10 humidity 70.0 270 > th dose dependent rect. 4 16
11 206.34 radiation 10.0 720 < th dose dependent rect. 14 2
15 206.78 humidity 90.0 270 < th dose independent rect. 9 6
19 207.01 humidity 90.0 270 < th dose dependent rect. 19 20
24 207.14 radiation 1.0 30 < th dose dependent sin 20 NA
25 207.29 humidity 70.0 30 > th dose independent rect. 6 14
39 207.79 humidity 50.0 10 > th dose dependent rect. 6 14
41 207.91 radiation 10.0 720 > th dose independent rect. 11 5
45 208.15 humidity 90.0 270 < th dose independent rect. 9 18
47 208.17 radiation 1.0 30 < th dose dependent rect. 15 5
52 208.24 temperature 20.0 270 > th dose independent rect. 9 6
54 208.25 radiation 20.0 30 < th dose dependent sin 18 NA
55 208.26 radiation 10.0 90 > th dose independent rect. 11 7
69 208.28 humidity 80.0 270 < th dose independent rect. 3 12
77 208.40 humidity 90.0 270 < th dose dependent rect. 9 6
95 208.56 temperature 20.0 270 > th dose independent rect. 5 15
97 208.57 humidity 50.0 10 > th dose dependent rect. 6 16
100 208.64 humidity 80.0 270 > th dose independent sin 1 NA
131 209.17 humidity 80.0 720 < th dose independent rect. 11 6
165 209.47 radiation 1.0 30 < th dose independent sin 19 NA
167 209.48 radiation 10.0 30 > th dose independent sin 17 NA
171 209.51 humidity 70.0 270 > th dose dependent sin 1 NA
178 209.56 radiation 1.0 270 < th dose independent rect. 8 11
181 209.58 humidity 90.0 90 < th dose independent rect. 11 6
217 209.79 humidity 90.0 90 < th dose dependent rect. 11 6
228 209.89 humidity 80.0 270 < th dose independent sin 2 NA
241 210.03 radiation 1.0 270 < th dose independent rect. 15 4
242 210.03 radiation 1.0 270 > th dose independent rect. 9 6
250 210.12 radiation 10.0 720 < th dose independent rect. 14 2
265 210.22 humidity 50.0 270 > th dose dependent rect. 3 8
277 210.30 radiation 1.0 30 < th dose independent rect. 15 5
279 210.31 humidity 80.0 270 > th dose independent rect. 4 7
316 210.44 humidity 50.0 14400 > th dose independent rect. 19 2
319 210.47 temperature 20.0 90 > th dose independent rect. 11 6
328 210.53 humidity 80.0 720 > th dose independent rect. 10 7
331 210.53 humidity 50.0 90 > th dose dependent rect. 17 18
379 210.65 radiation 30.0 270 < th dose independent rect. 15 18
384 210.69 radiation 1.0 270 < th dose dependent rect. 6 13
388 210.72 humidity 50.0 10 > th dose dependent rect. 18 2
398 210.77 humidity 80.0 720 > th dose independent rect. 15 1
402 210.78 humidity 70.0 720 > th dose dependent rect. 8 9
412 210.81 radiation 1.0 30 > th dose dependent sin 16 NA
419 210.84 humidity 80.0 720 > th dose independent rect. 7 10
427 210.88 temperature 10.0 90 > th dose dependent rect. 11 6
431 210.90 temperature 10.0 270 > th dose dependent rect. 3 6
460 211.03 humidity 80.0 720 > th dose independent rect. 14 3
464 211.04 radiation 10.0 720 < th dose dependent rect. 11 15
471 211.06 radiation 40.0 30 < th dose dependent rect. 6 14
486 211.11 humidity 80.0 720 > th dose dependent rect. 15 1
496 211.13 temperature 10.0 270 > th dose dependent rect. 9 6
513 211.16 humidity 80.0 720 > th dose independent rect. 23 20
529 211.23 temperature 25.0 10 > th dose independent rect. 12 6
534 211.24 radiation 10.0 1440 > th dose independent rect. 15 1
538 211.26 humidity 50.0 270 > th dose dependent rect. 15 18
566 211.31 wind 9.0 270 < th dose independent rect. 15 18
570 211.32 humidity 60.0 90 > th dose independent rect. 17 18
584 211.36 humidity 60.0 30 > th dose dependent rect. 8 12
596 211.41 radiation 40.0 10 < th dose dependent rect. 6 16
632 211.55 humidity 70.0 30 > th dose independent rect. 8 12
640 211.57 radiation 1.0 90 > th dose dependent rect. 11 18
642 211.58 radiation 1.0 90 > th dose dependent rect. 11 7
673 211.64 precipitation 0.1 270 < th dose independent rect. 9 6
674 211.64 precipitation 0.1 270 < th dose dependent rect. 9 6
681 211.66 temperature 20.0 30 > th dose independent rect. 18 2
773 211.88 wind 9.0 270 < th dose independent rect. 9 6
775 211.88 atmosphere 1015.0 270 < th dose independent rect. 9 6
778 211.88 temperature 10.0 270 > th dose independent rect. 15 18
780 211.88 radiation 20.0 270 < th dose dependent rect. 5 14
782 211.88 radiation 40.0 270 < th dose dependent rect. 4 16
795 211.91 radiation 40.0 270 < th dose dependent rect. 15 18
801 211.94 humidity 50.0 10 > th dose dependent rect. 8 14
831 212.04 temperature 30.0 10 < th dose independent rect. 18 2
846 212.09 humidity 70.0 10 > th dose independent rect. 6 6
862 212.11 wind 7.0 90 < th dose independent rect. 11 6
953 212.24 humidity 60.0 90 > th dose independent rect. 5 6
959 212.25 atmosphere 995.0 270 > th dose independent rect. 9 6
968 212.27 humidity 60.0 30 > th dose independent rect. 18 2
987 212.31 wind 1.0 270 > th dose independent rect. 9 6
989 212.32 precipitation 0.1 270 < th dose independent rect. 15 18
992 212.32 precipitation 0.1 270 < th dose dependent rect. 15 18