Os10g0375700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase fold-1 domain containing protein.
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Os10g0375700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase fold-1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.96 | 0.379 | 8.86 | -0.124 | 1.6 | -0.28 | -0.158 | 7.71 | -0.375 | 8.6 | 27.91 | 5037 | -- | -- |
| 73.29 | 0.399 | 9.04 | -1.67 | 1.74 | 0.634 | -0.272 | -- | -0.458 | 8.53 | 31.81 | 2512 | -- | -- |
| 64.96 | 0.375 | 8.85 | -0.103 | 1.6 | -0.339 | -- | 8.14 | -0.392 | 8.59 | 28.33 | 5029 | -- | -- |
| 71.06 | 0.393 | 9.03 | -1.76 | 1.63 | 0.711 | -- | -- | -0.475 | 8.59 | 29.88 | 3907 | -- | -- |
| 202.25 | 0.662 | 8.84 | 0.388 | -- | -0.526 | -- | 8.47 | -0.232 | -- | 26.81 | 2888 | -- | -- |
| 85.48 | 0.433 | 9.06 | -1.59 | 1.59 | -- | -0.281 | -- | -0.625 | 8.48 | -- | -- | -- | -- |
| 85.73 | 0.434 | 9.06 | -1.6 | 1.59 | -- | -- | -- | -0.625 | 8.48 | -- | -- | -- | -- |
| 212.14 | 0.678 | 9.07 | -1.72 | -- | 0.609 | -- | -- | -0.497 | -- | 29.78 | 5809 | -- | -- |
| 148.56 | 0.568 | 9 | -- | 1.61 | 0.316 | -- | -- | -0.379 | 8.6 | 30.99 | 4984 | -- | -- |
| 227.36 | 0.705 | 9.1 | -1.59 | -- | -- | -- | -- | -0.609 | -- | -- | -- | -- | -- |
| 152.79 | 0.578 | 9.02 | -- | 1.59 | -- | -- | -- | -0.447 | 8.55 | -- | -- | -- | -- |
| 248.82 | 0.735 | 9.1 | -- | -- | -0.806 | -- | -- | -0.63 | -- | 35.47 | 47520 | -- | -- |
| 293.87 | 0.8 | 9.06 | -- | -- | -- | -- | -- | -0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.87 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 6 |
| 4 | 65.08 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 6 | 65.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 7 | 65.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 8 | 65.31 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 13 | 65.43 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 15 | 65.43 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 20 | 65.48 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 26 | 65.53 | temperature | 25 | 4320 | > th | dose dependent | sin | 12 | NA |
| 35 | 65.62 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 62 | 65.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 63 | 65.76 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 78 | 65.86 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 91 | 65.95 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 5 |
| 117 | 66.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 118 | 66.11 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 124 | 66.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 132 | 66.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 145 | 66.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 152 | 66.18 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 22 |
| 175 | 66.24 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 211 | 66.32 | temperature | 30 | 1440 | > th | dose independent | sin | 7 | NA |
| 212 | 66.32 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 334 | 66.52 | temperature | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 351 | 66.58 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 8 |
| 359 | 66.60 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 11 |
| 363 | 66.61 | temperature | 30 | 4320 | < th | dose independent | sin | 3 | NA |
| 369 | 66.61 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 17 |
| 370 | 66.61 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 20 |
| 391 | 66.63 | temperature | 30 | 4320 | > th | dose independent | rect. | 10 | 8 |
| 453 | 66.69 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 466 | 66.70 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 17 |
| 475 | 66.71 | temperature | 30 | 4320 | > th | dose independent | sin | 3 | NA |
| 477 | 66.71 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 524 | 66.72 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 667 | 66.78 | temperature | 30 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 685 | 66.80 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |
| 808 | 66.83 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 832 | 66.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 861 | 66.89 | temperature | 30 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 896 | 66.93 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 904 | 66.95 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 949 | 67.00 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 950 | 67.00 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 962 | 67.02 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 986 | 67.03 | temperature | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |