Os10g0374700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0374700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.98 | 0.412 | 7.42 | -1.37 | 0.385 | -0.248 | 1.52 | -1.6 | -0.197 | 3.07 | 1011 | 13880 | -- | -- |
| 85.34 | 0.43 | 7.47 | -1.98 | 0.396 | -0.3 | 1.43 | -- | -0.338 | 2.83 | 1013 | 10504 | -- | -- |
| 84.58 | 0.428 | 7.42 | -1.42 | 0.392 | -0.252 | -- | -1.57 | -0.208 | 2.92 | 1011 | 13927 | -- | -- |
| 90.53 | 0.443 | 7.49 | -2 | 0.402 | -0.472 | -- | -- | -0.355 | 2.82 | 1013 | 4965 | -- | -- |
| 93.34 | 0.45 | 7.42 | -1.39 | -- | -0.261 | -- | -1.62 | -0.198 | -- | 1011 | 13961 | -- | -- |
| 88.47 | 0.441 | 7.47 | -1.88 | 0.399 | -- | 1.52 | -- | -0.268 | 3.09 | -- | -- | -- | -- |
| 96.05 | 0.459 | 7.47 | -1.91 | 0.404 | -- | -- | -- | -0.276 | 2.92 | -- | -- | -- | -- |
| 99.54 | 0.465 | 7.49 | -1.98 | -- | -0.498 | -- | -- | -0.337 | -- | 1013 | 4800 | -- | -- |
| 189.55 | 0.641 | 7.43 | -- | 0.357 | -0.435 | -- | -- | -0.0948 | 2.88 | 1014 | 3590 | -- | -- |
| 105.46 | 0.48 | 7.47 | -1.89 | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
| 192.24 | 0.649 | 7.42 | -- | 0.367 | -- | -- | -- | -0.0636 | 2.89 | -- | -- | -- | -- |
| 196.8 | 0.653 | 7.43 | -- | -- | -0.469 | -- | -- | -0.0911 | -- | 1014 | 3617 | -- | -- |
| 200 | 0.66 | 7.42 | -- | -- | -- | -- | -- | -0.0559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.02 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 2 | 75.23 | wind | 7.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 6 | 75.80 | wind | 7.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 7 | 75.91 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 9 | 76.06 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 12 | 76.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 14 | 76.28 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 18 | 76.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 20 | 76.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 21 | 76.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 25 | 76.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 27 | 76.34 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 29 | 76.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 31 | 76.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 39 | 76.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 44 | 76.73 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 49 | 76.83 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 51 | 76.85 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 54 | 76.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 4 |
| 58 | 76.88 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 64 | 76.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 69 | 76.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 95 | 76.96 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 96 | 76.96 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 109 | 76.97 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 9 |
| 127 | 77.00 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 137 | 77.01 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 186 | 77.08 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 201 | 77.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 209 | 77.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 211 | 77.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 219 | 77.12 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 220 | 77.12 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 12 |
| 272 | 77.16 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 288 | 77.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 309 | 77.18 | atmosphere | 1010.0 | 14400 | > th | dose dependent | no | NA | NA |
| 321 | 77.18 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 14 | 22 |
| 324 | 77.18 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 361 | 77.20 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 17 | 19 |
| 437 | 77.27 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 504 | 77.34 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 509 | 77.34 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 518 | 77.35 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 544 | 77.37 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 564 | 77.39 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 565 | 77.39 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 580 | 77.40 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 597 | 77.42 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 608 | 77.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 610 | 77.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 680 | 77.50 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 718 | 77.58 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 726 | 77.61 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 733 | 77.63 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 735 | 77.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 755 | 77.73 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 763 | 77.75 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 772 | 77.77 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 774 | 77.78 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 775 | 77.78 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 779 | 77.78 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 781 | 77.79 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 786 | 77.80 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 4 |
| 797 | 77.83 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 808 | 77.87 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 812 | 77.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 813 | 77.88 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 828 | 77.94 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 835 | 77.96 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 852 | 78.01 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 856 | 78.02 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 861 | 78.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 863 | 78.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 865 | 78.03 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 869 | 78.03 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 6 |
| 871 | 78.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 891 | 78.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 895 | 78.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 896 | 78.07 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 901 | 78.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 902 | 78.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 903 | 78.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 904 | 78.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 905 | 78.08 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 911 | 78.08 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 915 | 78.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 15 |
| 916 | 78.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 17 |
| 918 | 78.09 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 929 | 78.10 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 930 | 78.10 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 935 | 78.10 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 937 | 78.10 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 14 |