Os10g0372800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0372800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.55 | 0.612 | 3.82 | 0.813 | 0.521 | -1.76 | 0.119 | -3.21 | 3.36 | 2.95 | 19.88 | 4894 | -- | -- |
| 175.08 | 0.616 | 3.94 | 0.589 | 0.525 | -0.906 | 0.25 | -- | 3.26 | 2.94 | 21.8 | 3303 | -- | -- |
| 169.59 | 0.607 | 3.82 | 0.813 | 0.521 | -1.76 | -- | -3.22 | 3.36 | 2.99 | 19.87 | 4903 | -- | -- |
| 172.99 | 0.613 | 3.94 | 0.757 | 0.534 | -0.814 | -- | -- | 3.26 | 2.9 | 22.49 | 1824 | -- | -- |
| 184.61 | 0.633 | 3.81 | 0.81 | -- | -1.85 | -- | -3.41 | 3.37 | -- | 19.8 | 5105 | -- | -- |
| 199.3 | 0.662 | 3.88 | 1.07 | 0.54 | -- | 0.169 | -- | 3.55 | 2.71 | -- | -- | -- | -- |
| 199.4 | 0.661 | 3.88 | 1.07 | 0.542 | -- | -- | -- | 3.55 | 2.78 | -- | -- | -- | -- |
| 181.59 | 0.628 | 3.95 | 0.89 | -- | -0.834 | -- | -- | 3.31 | -- | 24.1 | 1142 | -- | -- |
| 181.35 | 0.627 | 3.98 | -- | 0.518 | -1.16 | -- | -- | 3.11 | 3.06 | 21.7 | 3388 | -- | -- |
| 216.44 | 0.687 | 3.87 | 1.09 | -- | -- | -- | -- | 3.57 | -- | -- | -- | -- | -- |
| 229.39 | 0.708 | 3.9 | -- | 0.563 | -- | -- | -- | 3.43 | 2.79 | -- | -- | -- | -- |
| 196.15 | 0.652 | 3.98 | -- | -- | -1.19 | -- | -- | 3.1 | -- | 21.76 | 3781 | -- | -- |
| 247.77 | 0.735 | 3.9 | -- | -- | -- | -- | -- | 3.45 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 3 | 166.36 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 5 | 166.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 32 | 167.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 37 | 167.43 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 53 | 167.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 69 | 167.99 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 84 | 168.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 87 | 168.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 124 | 168.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 145 | 168.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 162 | 169.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 190 | 169.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 220 | 169.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 230 | 169.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 256 | 169.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 257 | 169.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 274 | 169.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 276 | 169.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 289 | 169.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 320 | 169.94 | temperature | 20 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 323 | 169.95 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 329 | 169.97 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 346 | 170.02 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 349 | 170.03 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 355 | 170.05 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 372 | 170.12 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 415 | 170.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 432 | 170.29 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 456 | 170.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 474 | 170.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 486 | 170.39 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 17 |
| 528 | 170.49 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 537 | 170.51 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 561 | 170.58 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 946 | 171.09 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 6 |