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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0371600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0265) R2 : 0.992
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.28 (0.0878) R2dE : 0.00559 R2E : -0.396
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 13 (0.0646) R2dN8 : 1.39 R2N8 : 0.986
σ : 0.473
deviance : 102.96
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 10.8
memory length : 4528
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
108.79 0.49 2.9 -0.201 0.0882 -1.11 -0.195 -0.205 12.9 22.8 10.47 4516 -- --
102.98 0.473 2.92 -0.182 0.0745 -1.2 -0.184 -- 12.9 22.4 10.8 4524 -- --
102.66 0.472 2.88 -0.0891 0.0847 -1.1 -- 0.428 12.9 22.3 10.8 4524 -- --
102.36 0.471 2.89 -0.133 0.0662 -1.23 -- -- 13 20.9 10.8 4524 -- --
102.14 0.471 2.88 -0.0443 -- -1.22 -- 0.918 13 -- 10.8 4530 -- --
141.49 0.558 3 -0.115 0.367 -- -0.394 -- 12.5 23.7 -- -- -- --
142.16 0.558 3 -0.0994 0.369 -- -- -- 12.5 23.7 -- -- -- --
102.52 0.472 2.87 -0.14 -- -1.28 -- -- 13 -- 10.8 4524 -- --
102.82 0.472 2.89 -- 0.0734 -1.23 -- -- 13 19.9 10.8 4531 -- --
150.7 0.574 2.99 -0.0888 -- -- -- -- 12.5 -- -- -- -- --
142.42 0.558 3 -- 0.367 -- -- -- 12.5 23.7 -- -- -- --
102.96 0.473 2.87 -- -- -1.28 -- -- 13 -- 10.8 4528 -- --
150.91 0.573 2.99 -- -- -- -- -- 12.5 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 110.01 temperature 25.0 270 > th dose independent rect. 18 11
12 112.47 temperature 25.0 270 > th dose independent rect. 20 9
16 113.04 temperature 25.0 270 < th dose independent rect. 17 13
29 114.17 temperature 25.0 270 > th dose independent sin 13 NA
31 114.20 temperature 25.0 270 < th dose independent sin 13 NA
43 115.09 temperature 25.0 10 > th dose independent rect. 18 11
53 115.62 temperature 20.0 30 > th dose dependent rect. 18 11
85 118.06 temperature 25.0 10 > th dose independent rect. 20 9
86 118.07 temperature 25.0 90 > th dose independent rect. 24 5
92 118.26 temperature 25.0 270 > th dose dependent rect. 24 4
96 118.40 temperature 25.0 720 > th dose independent rect. 18 1
98 118.55 temperature 25.0 270 > th dose independent rect. 24 2
102 118.69 temperature 25.0 270 > th dose dependent rect. 22 7
110 118.94 wind 9.0 4320 > th dose dependent rect. 13 1
128 119.58 temperature 20.0 720 > th dose dependent rect. 5 2
143 120.04 temperature 20.0 30 > th dose dependent rect. 20 9
145 120.11 temperature 20.0 30 > th dose dependent rect. 22 7
149 120.41 temperature 25.0 10 > th dose independent rect. 22 7
165 120.79 wind 9.0 4320 > th dose dependent rect. 13 3
170 120.95 wind 9.0 4320 > th dose independent rect. 15 1
199 121.51 wind 9.0 4320 > th dose independent rect. 13 1
207 121.62 wind 9.0 4320 > th dose independent rect. 13 3
238 122.41 temperature 10.0 720 > th dose dependent rect. 5 2
240 122.43 wind 3.0 720 < th dose independent rect. 2 1
246 122.49 wind 9.0 4320 < th dose independent rect. 13 1
252 122.54 wind 5.0 10 > th dose dependent rect. 21 1
263 122.65 wind 9.0 4320 > th dose dependent rect. 15 1
265 122.66 atmosphere 1005.0 30 > th dose dependent rect. 18 5
267 122.71 wind 5.0 10 > th dose independent rect. 21 2
273 122.76 humidity 80.0 10 < th dose dependent rect. 22 1
289 122.93 temperature 25.0 720 < th dose independent rect. 16 8
300 123.16 radiation 30.0 90 < th dose dependent rect. 9 20
323 123.37 wind 9.0 4320 < th dose independent rect. 13 3
326 123.40 temperature 25.0 720 > th dose dependent rect. 18 1
343 123.60 temperature 25.0 90 > th dose independent rect. 2 2
368 123.94 wind 9.0 4320 < th dose independent rect. 15 1
375 124.02 humidity 80.0 10 < th dose independent rect. 21 1
387 124.19 atmosphere 1005.0 270 > th dose dependent rect. 18 1
396 124.33 radiation 1.0 720 > th dose independent rect. 17 1
416 124.50 atmosphere 1005.0 30 > th dose dependent rect. 24 5
447 124.86 radiation 20.0 90 < th dose independent rect. 9 20
452 124.88 temperature 25.0 90 > th dose dependent rect. 2 3
464 125.01 temperature 25.0 720 < th dose independent rect. 23 1
495 125.25 radiation 20.0 90 < th dose dependent rect. 7 22
501 125.32 temperature 25.0 720 > th dose independent rect. 6 1
502 125.34 radiation 10.0 720 < th dose independent rect. 17 10
545 125.76 temperature 25.0 10 > th dose independent rect. 6 5
551 125.79 temperature 10.0 720 > th dose dependent rect. 3 4
568 125.88 temperature 10.0 720 > th dose dependent rect. 17 2
574 125.91 temperature 25.0 270 > th dose independent rect. 22 1
575 125.92 wind 3.0 720 < th dose independent rect. 24 4
595 126.06 radiation 1.0 30 > th dose independent rect. 12 23
602 126.11 temperature 25.0 720 > th dose independent rect. 5 3
618 126.17 wind 5.0 720 < th dose dependent rect. 2 1
619 126.17 temperature 10.0 90 > th dose dependent rect. 5 12
620 126.18 temperature 25.0 10 > th dose independent sin 13 NA
670 126.46 atmosphere 1005.0 270 > th dose dependent rect. 24 2
677 126.50 radiation 1.0 720 < th dose independent rect. 17 7
679 126.50 radiation 10.0 90 < th dose independent rect. 7 22
684 126.52 wind 9.0 4320 > th dose dependent rect. 5 11
701 126.61 radiation 10.0 720 < th dose independent rect. 17 2
707 126.63 wind 3.0 720 > th dose independent rect. 3 1
713 126.64 atmosphere 1005.0 30 > th dose dependent rect. 20 3
718 126.65 humidity 50.0 720 > th dose dependent rect. 23 1
724 126.68 wind 9.0 4320 > th dose dependent rect. 23 17
734 126.71 humidity 80.0 4320 < th dose dependent rect. 22 1
736 126.73 wind 3.0 720 > th dose independent rect. 17 2
757 126.84 radiation 20.0 270 < th dose dependent rect. 8 5
766 126.88 atmosphere 995.0 90 > th dose dependent rect. 17 12
768 126.89 temperature 25.0 10 > th dose independent rect. 24 5
788 126.97 atmosphere 995.0 30 > th dose dependent rect. 11 12
798 127.04 temperature 25.0 720 > th dose dependent sin 13 NA
799 127.05 humidity 50.0 720 > th dose independent rect. 17 10
815 127.14 radiation 40.0 30 < th dose independent rect. 23 12
853 127.33 temperature 10.0 720 > th dose dependent rect. 3 6
863 127.36 wind 9.0 720 < th dose dependent rect. 24 3
864 127.37 wind 1.0 720 > th dose independent rect. 11 1
866 127.37 temperature 20.0 30 > th dose dependent rect. 22 5
889 127.51 wind 7.0 10 < th dose independent rect. 23 12
921 127.64 radiation 1.0 720 < th dose dependent rect. 17 7
924 127.66 humidity 50.0 720 > th dose independent rect. 17 19
927 127.68 temperature 20.0 30 > th dose dependent rect. 5 6
937 127.73 radiation 1.0 720 > th dose independent rect. 11 1
938 127.73 temperature 10.0 1440 > th dose independent rect. 12 12
941 127.73 temperature 10.0 1440 > th dose independent rect. 24 12
944 127.73 atmosphere 995.0 1440 > th dose independent rect. 24 12
950 127.75 temperature 20.0 10 < th dose dependent rect. 22 1
954 127.77 temperature 10.0 720 > th dose independent rect. 19 5
956 127.77 humidity 50.0 720 > th dose independent rect. 19 5
957 127.77 atmosphere 995.0 720 > th dose independent rect. 19 5
958 127.77 radiation 1.0 720 < th dose independent rect. 19 5
963 127.77 temperature 10.0 720 > th dose independent rect. 24 19
964 127.77 radiation 1.0 720 < th dose dependent rect. 19 5
979 127.81 temperature 10.0 720 > th dose independent rect. 11 1
980 127.81 atmosphere 995.0 720 > th dose independent rect. 11 1
981 127.81 atmosphere 1015.0 720 < th dose independent rect. 11 1
982 127.81 precipitation 0.1 720 < th dose independent rect. 11 1
984 127.81 temperature 10.0 720 > th dose independent rect. 12 23
986 127.81 precipitation 0.1 720 < th dose dependent rect. 11 1
987 127.82 precipitation 0.1 720 < th dose independent rect. 23 1
989 127.82 wind 9.0 4320 > th dose independent rect. 5 11
991 127.82 precipitation 0.1 720 < th dose dependent rect. 23 1
993 127.83 temperature 10.0 720 > th dose independent rect. 7 5
994 127.83 atmosphere 995.0 720 > th dose independent rect. 7 5
995 127.83 atmosphere 1015.0 720 < th dose independent rect. 7 5
997 127.83 temperature 30.0 30 < th dose independent rect. 23 12
998 127.83 temperature 10.0 720 > th dose independent rect. 12 19
1000 127.84 wind 9.0 720 < th dose independent rect. 23 1