Os10g0371200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0371200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.38 | 0.461 | 6.55 | -1.52 | 0.823 | -2.04 | -0.187 | 0.00691 | 0.717 | 2.77 | 18.8 | 5598 | -- | -- |
| 96.38 | 0.457 | 6.55 | -1.52 | 0.823 | -2.05 | -0.187 | -- | 0.717 | 2.78 | 18.8 | 5597 | -- | -- |
| 96.5 | 0.458 | 6.55 | -1.52 | 0.822 | -2.04 | -- | 0.0228 | 0.717 | 2.79 | 18.8 | 5597 | -- | -- |
| 96.5 | 0.458 | 6.54 | -1.52 | 0.822 | -2.05 | -- | -- | 0.718 | 2.79 | 18.79 | 5597 | -- | -- |
| 134.7 | 0.541 | 6.53 | -1.51 | -- | -2.26 | -- | -0.303 | 0.736 | -- | 18.5 | 5427 | -- | -- |
| 157.27 | 0.588 | 6.44 | -0.219 | 0.866 | -- | -0.222 | -- | 1.2 | 2.83 | -- | -- | -- | -- |
| 157.44 | 0.588 | 6.43 | -0.214 | 0.866 | -- | -- | -- | 1.2 | 2.84 | -- | -- | -- | -- |
| 134.77 | 0.541 | 6.54 | -1.53 | -- | -2.16 | -- | -- | 0.733 | -- | 18.52 | 5412 | -- | -- |
| 117.38 | 0.505 | 6.49 | -- | 0.75 | -1.03 | -- | -- | 0.94 | 2.95 | 22 | 1238 | -- | -- |
| 200.81 | 0.662 | 6.43 | -0.177 | -- | -- | -- | -- | 1.23 | -- | -- | -- | -- | -- |
| 158.65 | 0.589 | 6.43 | -- | 0.862 | -- | -- | -- | 1.23 | 2.84 | -- | -- | -- | -- |
| 149.02 | 0.569 | 6.5 | -- | -- | -1.07 | -- | -- | 0.924 | -- | 22.2 | 1048 | -- | -- |
| 201.64 | 0.663 | 6.43 | -- | -- | -- | -- | -- | 1.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.38 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 7 | 92.23 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 32 | 95.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 33 | 95.13 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 35 | 95.17 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 44 | 95.35 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 59 | 95.76 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 61 | 95.79 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 67 | 95.86 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 71 | 95.94 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 83 | 96.04 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 87 | 96.04 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 104 | 96.18 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 125 | 96.30 | humidity | 50 | 43200 | < th | dose dependent | rect. | 7 | 7 |
| 127 | 96.31 | humidity | 50 | 43200 | < th | dose dependent | rect. | 21 | 17 |
| 156 | 96.39 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 157 | 96.39 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 161 | 96.42 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 176 | 96.50 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 181 | 96.54 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 209 | 96.61 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 225 | 96.66 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 248 | 96.71 | humidity | 50 | 43200 | > th | dose independent | sin | 7 | NA |
| 255 | 96.73 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 256 | 96.74 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 18 | NA |
| 278 | 96.79 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 18 | NA |
| 287 | 96.82 | humidity | 50 | 43200 | < th | dose dependent | sin | 7 | NA |
| 328 | 96.91 | humidity | 50 | 43200 | < th | dose independent | sin | 7 | NA |
| 341 | 96.95 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 368 | 96.99 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 371 | 97.00 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 417 | 97.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 13 |
| 478 | 97.24 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 501 | 97.28 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 554 | 97.34 | atmosphere | 1015 | 14400 | > th | dose dependent | sin | 13 | NA |
| 562 | 97.36 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 651 | 97.51 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 675 | 97.57 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 682 | 97.58 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 683 | 97.58 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 761 | 97.66 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 5 | 19 |
| 792 | 97.69 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 9 | 22 |
| 882 | 97.80 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 940 | 97.86 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 945 | 97.86 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 949 | 97.87 | temperature | 20 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 956 | 97.87 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 967 | 97.89 | wind | 7 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 972 | 97.89 | atmosphere | 1015 | 14400 | > th | dose dependent | no | NA | NA |