Os10g0370700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nitrate transporter (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os10g0370700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nitrate transporter (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 619.16 | 1.17 | 4 | 1.91 | 0.0224 | -0.92 | -1.69 | 18.9 | -0.92 | 3.55 | 31.16 | 1318 | -- | -- |
| 631.05 | 1.17 | 4.41 | -1.33 | 0.0291 | 1.29 | -1.2 | -- | -1.08 | 3.04 | 27.68 | 1355 | -- | -- |
| 627.76 | 1.17 | 4.01 | 1.86 | 0.0113 | -0.91 | -- | 18.6 | -0.915 | 3.25 | 31.5 | 1318 | -- | -- |
| 631.78 | 1.17 | 4.61 | -2.48 | 0.0315 | 2.26 | -- | -- | -1.99 | 0.0402 | -118.3 | 12841 | -- | -- |
| 627.74 | 1.17 | 4 | 1.92 | -- | -0.975 | -- | 19.2 | -0.919 | -- | 31.68 | 1318 | -- | -- |
| 706.83 | 1.25 | 4.42 | -0.932 | 0.203 | -- | -1.31 | -- | -1.16 | 3.83 | -- | -- | -- | -- |
| 711.9 | 1.25 | 4.42 | -0.914 | 0.199 | -- | -- | -- | -1.15 | 4.3 | -- | -- | -- | -- |
| 631.84 | 1.17 | 4.61 | -2.48 | -- | 2.27 | -- | -- | -2 | -- | -112.5 | 12824 | -- | -- |
| 699.22 | 1.24 | 4.45 | -- | 0.671 | 1.81 | -- | -- | -1.26 | 2.84 | -118.3 | 12841 | -- | -- |
| 714.04 | 1.25 | 4.42 | -0.906 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 733.9 | 1.27 | 4.4 | -- | 0.182 | -- | -- | -- | -1.05 | 4.4 | -- | -- | -- | -- |
| 703.59 | 1.24 | 4.44 | -- | -- | 1.28 | -- | -- | -1.23 | -- | -85.26 | 1225 | -- | -- |
| 735.68 | 1.27 | 4.4 | -- | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 598.32 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 598.46 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 4 | 599.01 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 599.19 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 8 | 599.28 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 17 | 599.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 28 | 600.05 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 39 | 600.28 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 61 | 600.63 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 123 | 601.74 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 184 | 602.55 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 254 | 603.49 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 305 | 603.79 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 308 | 603.83 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 309 | 603.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 19 |
| 314 | 603.86 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 337 | 603.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 494 | 605.06 | humidity | 80.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 515 | 605.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 535 | 605.24 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 551 | 605.35 | humidity | 70.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 727 | 606.30 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 962 | 607.37 | humidity | 60.0 | 14400 | > th | dose dependent | no | NA | NA |
| 997 | 607.45 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 21 | 23 |