Os10g0365800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0365800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.35 | 0.283 | 12.4 | 0.266 | 0.536 | -0.993 | 1.59 | -1.7 | 0.0952 | 23.5 | 26.33 | 93 | -- | -- |
| 39.75 | 0.296 | 12.5 | -0.00679 | 0.593 | -0.942 | 1.18 | -- | 0.0722 | 23.5 | 31.82 | 104 | -- | -- |
| 41.47 | 0.3 | 12.4 | 0.297 | 0.204 | -0.885 | -- | -2.11 | 0.172 | 22.5 | 33.5 | 782 | -- | -- |
| 45.29 | 0.313 | 12.5 | -0.0626 | 0.424 | -0.997 | -- | -- | 0.0797 | 0.406 | 34.41 | 295 | -- | -- |
| 43.6 | 0.308 | 12.4 | 0.285 | -- | -1.05 | -- | -2.21 | 0.167 | -- | 59.64 | 782 | -- | -- |
| 50.65 | 0.334 | 12.4 | 0.197 | 0.408 | -- | 1.2 | -- | 0.226 | 21.9 | -- | -- | -- | -- |
| 56.21 | 0.351 | 12.4 | 0.152 | 0.405 | -- | -- | -- | 0.224 | 21.7 | -- | -- | -- | -- |
| 47.56 | 0.321 | 12.5 | -0.123 | -- | -1.08 | -- | -- | 0.0574 | -- | 46.73 | 761 | -- | -- |
| 45.39 | 0.314 | 12.5 | -- | 0.413 | -0.982 | -- | -- | 0.0903 | 0.37 | 50.76 | 295 | -- | -- |
| 65.96 | 0.379 | 12.4 | 0.155 | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
| 56.81 | 0.353 | 12.4 | -- | 0.406 | -- | -- | -- | 0.207 | 21.7 | -- | -- | -- | -- |
| 47.91 | 0.322 | 12.4 | -- | -- | -1.03 | -- | -- | 0.0771 | -- | 57.74 | 752 | -- | -- |
| 66.6 | 0.381 | 12.4 | -- | -- | -- | -- | -- | 0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 24 | 33.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 97 | 35.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 111 | 35.41 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 118 | 35.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 119 | 35.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 122 | 35.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 136 | 35.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 161 | 35.69 | temperature | 10 | 270 | > th | dose dependent | sin | 13 | NA |
| 198 | 35.83 | temperature | 30 | 270 | < th | dose dependent | sin | 13 | NA |
| 280 | 36.16 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 283 | 36.18 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 307 | 36.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 337 | 36.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 351 | 36.41 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 362 | 36.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 385 | 36.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 394 | 36.57 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 406 | 36.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 410 | 36.62 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 424 | 36.65 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 440 | 36.67 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 446 | 36.67 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 452 | 36.69 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 466 | 36.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 475 | 36.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 483 | 36.75 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 484 | 36.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 499 | 36.76 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 502 | 36.77 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 508 | 36.77 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 524 | 36.79 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 537 | 36.80 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 545 | 36.81 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 572 | 36.84 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 726 | 37.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 728 | 37.03 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 762 | 37.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 924 | 37.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 977 | 37.26 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 1000 | 37.28 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |