Os10g0364900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0364900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 439.02 | 0.984 | 8.68 | -3.4 | 5.55 | 0.319 | 0.551 | -5.04 | 0.0533 | 21.1 | 20.25 | 900 | -- | -- |
| 481.38 | 1.02 | 8.56 | -2.76 | 5.49 | 1.73 | -0.802 | -- | 0.188 | 21.1 | 18.61 | 698 | -- | -- |
| 439.96 | 0.977 | 8.67 | -3.38 | 5.55 | 0.338 | -- | -4.85 | 0.0595 | 21.1 | 20.27 | 904 | -- | -- |
| 482.28 | 1.02 | 8.54 | -2.75 | 5.43 | 1.81 | -- | -- | 0.22 | 21.1 | 18.55 | 735 | -- | -- |
| 2128.53 | 2.15 | 8.6 | -3.73 | -- | 1.73 | -- | -4.65 | -0.463 | -- | 21.2 | 778 | -- | -- |
| 522.94 | 1.07 | 8.5 | -2.21 | 5.59 | -- | -0.811 | -- | 0.437 | 21.2 | -- | -- | -- | -- |
| 525.26 | 1.07 | 8.5 | -2.18 | 5.59 | -- | -- | -- | 0.438 | 21.2 | -- | -- | -- | -- |
| 1775.54 | 1.96 | 8.7 | -3.48 | -- | 3.37 | -- | -- | -0.737 | -- | 25.94 | 671 | -- | -- |
| 646.57 | 1.19 | 8.45 | -- | 5.59 | 0.852 | -- | -- | 0.667 | 21.1 | 17 | 410 | -- | -- |
| 2335.43 | 2.26 | 8.35 | -2.16 | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
| 650.85 | 1.19 | 8.44 | -- | 5.59 | -- | -- | -- | 0.681 | 21.1 | -- | -- | -- | -- |
| 2026.94 | 2.1 | 8.51 | -- | -- | 2.98 | -- | -- | -0.199 | -- | 25.7 | 653 | -- | -- |
| 2459.07 | 2.31 | 8.29 | -- | -- | -- | -- | -- | 0.65 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 431.34 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 3 | 431.53 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 14 |
| 6 | 432.31 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 9 | 432.56 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 10 | 432.57 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 25 | 433.86 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 1 |
| 27 | 434.00 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 4 |
| 29 | 434.21 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 18 |
| 40 | 434.79 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 59 | 435.98 | radiation | 20 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 61 | 436.08 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 20 |
| 74 | 436.83 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 77 | 436.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 11 |
| 81 | 437.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 82 | 437.05 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 83 | 437.06 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 86 | 437.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 13 |
| 88 | 437.24 | radiation | 20 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 108 | 438.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 9 |
| 117 | 438.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 119 | 438.19 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 150 | 438.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 189 | 439.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 202 | 440.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 10 |
| 207 | 440.20 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 228 | 440.51 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 233 | 440.65 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 241 | 440.81 | radiation | 20 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 255 | 441.03 | radiation | 20 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 261 | 441.09 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 268 | 441.17 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 1 |
| 272 | 441.26 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 279 | 441.42 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 334 | 442.76 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 384 | 443.39 | radiation | 20 | 10 | < th | dose dependent | sin | 2 | NA |
| 418 | 443.85 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 23 |
| 424 | 443.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 432 | 444.06 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 452 | 444.41 | radiation | 20 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 465 | 444.53 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 501 | 444.89 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 23 |
| 512 | 444.98 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 4 |
| 515 | 445.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 520 | 445.03 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 522 | 445.04 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 569 | 445.43 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 577 | 445.46 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 596 | 445.59 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 608 | 445.74 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 633 | 445.88 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 673 | 446.08 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 684 | 446.15 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 685 | 446.16 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 689 | 446.17 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 23 |
| 705 | 446.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 718 | 446.34 | humidity | 80 | 14400 | > th | dose dependent | sin | 11 | NA |
| 726 | 446.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 728 | 446.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 5 |
| 733 | 446.42 | humidity | 70 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 736 | 446.43 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 22 |
| 744 | 446.49 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 758 | 446.57 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 23 |
| 843 | 446.89 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 914 | 447.21 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 925 | 447.24 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 966 | 447.40 | humidity | 80 | 43200 | > th | dose independent | sin | 13 | NA |