Os10g0364600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0364600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.21 | 0.473 | 3.46 | 0.85 | 0.0787 | -0.354 | 1.1 | 1.39 | 0.269 | 16.8 | 21.11 | 5262 | -- | -- |
| 103.14 | 0.473 | 3.51 | 0.668 | 0.0236 | -0.534 | 1.18 | -- | 0.23 | 17.5 | 21.5 | 9638 | -- | -- |
| 103.27 | 0.473 | 3.46 | 0.813 | 0.171 | -0.355 | -- | 1.3 | 0.281 | 13.3 | 21.2 | 5087 | -- | -- |
| 105.03 | 0.477 | 3.52 | 0.605 | 0.148 | -0.513 | -- | -- | 0.205 | 12.6 | 21.5 | 8182 | -- | -- |
| 104.73 | 0.477 | 3.46 | 0.847 | -- | -0.369 | -- | 1.35 | 0.279 | -- | 21.1 | 5141 | -- | -- |
| 109.71 | 0.491 | 3.56 | 0.214 | 0.0904 | -- | 1.06 | -- | 0.0222 | 16.7 | -- | -- | -- | -- |
| 111.3 | 0.494 | 3.56 | 0.222 | 0.172 | -- | -- | -- | 0.0282 | 12.8 | -- | -- | -- | -- |
| 106.31 | 0.48 | 3.51 | 0.596 | -- | -0.538 | -- | -- | 0.211 | -- | 21.49 | 9470 | -- | -- |
| 109.92 | 0.488 | 3.54 | -- | 0.147 | -0.268 | -- | -- | 0.0921 | 12.4 | 22.9 | 5358 | -- | -- |
| 113.15 | 0.497 | 3.56 | 0.216 | -- | -- | -- | -- | 0.0251 | -- | -- | -- | -- | -- |
| 112.6 | 0.496 | 3.56 | -- | 0.168 | -- | -- | -- | 0.0035 | 12.7 | -- | -- | -- | -- |
| 111.29 | 0.491 | 3.55 | -- | -- | -0.269 | -- | -- | 0.0878 | -- | 23.6 | 5364 | -- | -- |
| 114.37 | 0.499 | 3.56 | -- | -- | -- | -- | -- | 0.00116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 5 | 96.64 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 6 | 96.65 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 8 | 96.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 37 | 97.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 70 | 97.34 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 76 | 97.43 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 78 | 97.46 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 80 | 97.47 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 82 | 97.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 85 | 97.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 87 | 97.58 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 88 | 97.60 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 114 | 97.78 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 128 | 97.86 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 130 | 97.89 | radiation | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 149 | 97.96 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 151 | 97.96 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 155 | 97.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 157 | 97.97 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 166 | 98.00 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 179 | 98.02 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 185 | 98.05 | radiation | 1.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 225 | 98.09 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 256 | 98.13 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 284 | 98.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 330 | 98.22 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 339 | 98.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 17 |
| 371 | 98.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 14 | 18 |
| 386 | 98.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 394 | 98.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 395 | 98.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 400 | 98.31 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 434 | 98.34 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 14 |
| 442 | 98.35 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 445 | 98.35 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 11 | 12 |
| 501 | 98.40 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 520 | 98.42 | humidity | 90.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 530 | 98.43 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 540 | 98.44 | humidity | 90.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 541 | 98.44 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 549 | 98.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 579 | 98.47 | humidity | 90.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 581 | 98.47 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 588 | 98.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 602 | 98.49 | humidity | 90.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 623 | 98.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 672 | 98.52 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 678 | 98.52 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 685 | 98.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 691 | 98.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 711 | 98.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 714 | 98.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 715 | 98.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 721 | 98.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 725 | 98.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 753 | 98.56 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 775 | 98.57 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 776 | 98.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 834 | 98.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 879 | 98.63 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 882 | 98.63 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 928 | 98.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 1 |