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Os10g0362700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0282) R2 : 0.61
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.83 (0.0695) R2dC : 0.598 R2C : 0.591
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.242 (0.0592) R2dN8 : 0.0185 R2N8 : 0.0117
σ : 0.53
deviance : 128.58
__
_____
C
peak time of C : 9.31
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.29 0.484 11.2 0.371 1.86 -0.592 0.652 1.82 0.157 8.76 86.84 27 -- --
115.75 0.501 11.2 0.465 1.85 -0.501 0.461 -- 0.17 8.67 85.79 14 -- --
107.6 0.483 11.2 0.4 1.86 -0.603 -- 1.69 0.155 8.71 86.38 24 -- --
115.88 0.501 11.2 0.477 1.85 -0.519 -- -- 0.18 8.69 85.97 14 -- --
299.58 0.811 11.2 0.419 -- -0.573 -- 1.21 0.188 -- 83 11 -- --
123.97 0.522 11.2 0.403 1.83 -- 0.212 -- 0.288 9.32 -- -- -- --
124.13 0.522 11.2 0.411 1.83 -- -- -- 0.288 9.33 -- -- -- --
303.92 0.815 11.2 0.466 -- -0.526 -- -- 0.216 -- 81 6 -- --
121.78 0.514 11.2 -- 1.84 -0.466 -- -- 0.137 8.73 85.4 13 -- --
319.96 0.836 11.2 0.402 -- -- -- -- 0.295 -- -- -- -- --
128.58 0.53 11.2 -- 1.83 -- -- -- 0.242 9.31 -- -- -- --
308.03 0.82 11.2 -- -- -0.505 -- -- 0.194 -- 74.95 6 -- --
324.21 0.84 11.2 -- -- -- -- -- 0.251 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.69 radiation 1.0 30 < th dose dependent rect. 1 19
3 99.51 radiation 1.0 30 < th dose independent rect. 1 19
4 99.65 atmosphere 1015.0 90 < th dose dependent rect. 1 4
6 100.25 temperature 10.0 30 > th dose dependent rect. 20 5
9 100.78 atmosphere 1015.0 270 < th dose dependent rect. 1 1
11 101.25 humidity 90.0 30 < th dose independent rect. 20 20
14 101.49 humidity 70.0 30 > th dose dependent rect. 1 4
17 101.59 humidity 80.0 270 > th dose independent rect. 1 1
19 101.63 humidity 80.0 90 > th dose independent rect. 1 4
21 101.69 atmosphere 995.0 90 > th dose independent rect. 5 20
22 101.70 humidity 90.0 30 < th dose independent rect. 20 22
24 101.78 wind 5.0 30 < th dose independent rect. 20 5
28 101.90 atmosphere 1010.0 30 < th dose independent rect. 20 5
30 101.94 humidity 60.0 270 > th dose dependent rect. 1 1
39 102.13 radiation 1.0 30 < th dose independent rect. 1 5
40 102.14 temperature 20.0 90 > th dose independent rect. 1 4
41 102.15 humidity 90.0 10 < th dose independent rect. 5 20
44 102.21 radiation 1.0 30 < th dose independent rect. 1 7
48 102.22 radiation 1.0 90 < th dose dependent rect. 1 10
50 102.23 radiation 1.0 30 < th dose dependent rect. 1 7
57 102.27 wind 9.0 30 < th dose independent rect. 1 19
60 102.29 temperature 10.0 1440 > th dose independent rect. 21 5
63 102.29 temperature 30.0 1440 < th dose independent rect. 21 5
67 102.29 humidity 50.0 1440 > th dose independent rect. 21 5
73 102.29 atmosphere 995.0 1440 > th dose independent rect. 21 5
74 102.29 radiation 1.0 1440 < th dose independent rect. 21 5
94 102.29 temperature 10.0 1440 > th dose independent rect. 2 19
97 102.29 radiation 20.0 1440 < th dose dependent rect. 21 5
102 102.31 precipitation 0.1 270 < th dose independent rect. 2 23
103 102.31 precipitation 0.1 270 < th dose dependent rect. 2 23
111 102.36 radiation 1.0 30 < th dose dependent rect. 1 5
114 102.39 temperature 10.0 30 > th dose independent rect. 20 5
115 102.39 temperature 30.0 30 < th dose independent rect. 20 5
116 102.39 humidity 50.0 30 > th dose independent rect. 20 5
119 102.39 atmosphere 995.0 30 > th dose independent rect. 20 5
120 102.39 radiation 1.0 30 < th dose independent rect. 20 5
125 102.39 temperature 10.0 30 > th dose independent rect. 1 19
127 102.39 atmosphere 1015.0 30 < th dose independent rect. 1 19
128 102.39 radiation 1.0 30 < th dose dependent rect. 20 5
133 102.41 temperature 20.0 270 > th dose independent rect. 1 1
142 102.51 temperature 15.0 270 > th dose independent rect. 3 11
148 102.57 temperature 10.0 90 > th dose independent rect. 1 4
150 102.57 temperature 30.0 90 < th dose independent rect. 1 4
151 102.57 humidity 50.0 90 > th dose independent rect. 1 4
154 102.57 atmosphere 995.0 90 > th dose independent rect. 1 4
155 102.57 atmosphere 1010.0 90 < th dose independent rect. 1 4
160 102.57 temperature 10.0 90 > th dose independent rect. 5 20
161 102.58 wind 9.0 90 < th dose independent rect. 1 4
186 102.64 precipitation 0.1 30 < th dose independent rect. 20 5
187 102.64 precipitation 0.1 30 < th dose dependent rect. 20 5
188 102.67 precipitation 0.1 90 < th dose independent rect. 5 20
189 102.67 precipitation 0.1 90 < th dose dependent rect. 5 20
190 102.68 temperature 10.0 270 > th dose independent rect. 1 1
192 102.68 temperature 30.0 270 < th dose independent rect. 1 1
193 102.68 humidity 50.0 270 > th dose independent rect. 1 1
196 102.68 atmosphere 995.0 270 > th dose independent rect. 1 1
197 102.68 atmosphere 1010.0 270 < th dose independent rect. 1 1
199 102.68 radiation 1.0 270 < th dose independent rect. 1 1
204 102.68 precipitation 0.1 270 < th dose independent rect. 1 1
206 102.68 temperature 10.0 270 > th dose independent rect. 2 23
207 102.68 radiation 1.0 270 < th dose dependent rect. 1 1
212 102.68 precipitation 0.1 270 < th dose dependent rect. 1 1
217 102.74 humidity 70.0 270 > th dose dependent rect. 23 4
219 102.76 wind 9.0 270 < th dose independent rect. 1 1
246 102.81 atmosphere 1015.0 270 < th dose dependent rect. 23 5
254 102.89 temperature 10.0 270 > th dose dependent rect. 1 1
256 102.91 radiation 40.0 270 < th dose dependent rect. 19 14
257 102.92 temperature 10.0 30 > th dose dependent rect. 1 4
268 103.01 temperature 10.0 270 > th dose dependent rect. 20 1
270 103.02 humidity 90.0 30 < th dose independent rect. 20 18
276 103.06 precipitation 0.1 90 < th dose independent rect. 1 4
277 103.06 precipitation 0.1 90 < th dose dependent rect. 1 4
278 103.10 radiation 1.0 90 < th dose dependent rect. 23 21
279 103.11 wind 9.0 30 < th dose independent rect. 5 20
281 103.12 wind 9.0 10 < th dose dependent rect. 20 5
298 103.13 precipitation 0.1 30 < th dose independent rect. 1 19
304 103.13 precipitation 0.1 30 < th dose dependent rect. 1 19
307 103.14 radiation 1.0 30 < th dose dependent rect. 1 15
308 103.15 atmosphere 1015.0 30 < th dose independent rect. 5 20
313 103.17 radiation 1.0 30 < th dose independent rect. 1 15
361 103.54 radiation 1.0 90 < th dose independent rect. 23 21
362 103.59 wind 5.0 270 < th dose independent rect. 19 3
371 103.71 wind 5.0 270 < th dose independent rect. 20 1
372 103.72 wind 1.0 30 > th dose independent rect. 20 5
374 103.74 precipitation 0.1 270 < th dose independent rect. 3 11
376 103.74 precipitation 0.1 270 < th dose dependent rect. 3 11
407 104.08 wind 1.0 30 > th dose independent rect. 5 20
415 104.14 wind 1.0 90 > th dose independent rect. 1 4
421 104.17 atmosphere 995.0 270 > th dose independent rect. 2 23
425 104.25 wind 9.0 270 < th dose independent rect. 14 13
441 104.36 temperature 30.0 90 < th dose independent rect. 5 20
444 104.37 atmosphere 995.0 270 > th dose independent rect. 3 11
445 104.37 atmosphere 1015.0 270 < th dose independent rect. 3 11
446 104.37 temperature 10.0 270 > th dose independent rect. 14 13
448 104.37 temperature 25.0 90 > th dose dependent rect. 20 11
451 104.39 temperature 10.0 270 > th dose independent rect. 23 5
452 104.39 temperature 30.0 270 < th dose independent rect. 23 5
453 104.39 humidity 50.0 270 > th dose independent rect. 23 5
456 104.39 atmosphere 995.0 270 > th dose independent rect. 23 5
457 104.39 radiation 1.0 270 < th dose independent rect. 23 5
467 104.39 radiation 1.0 270 < th dose dependent rect. 23 5
474 104.42 wind 9.0 270 < th dose independent rect. 23 5
492 104.57 humidity 50.0 30 > th dose independent rect. 1 19
500 104.64 wind 9.0 270 < th dose independent rect. 21 23
502 104.65 temperature 25.0 90 > th dose independent rect. 20 12
505 104.66 atmosphere 1015.0 270 < th dose independent rect. 20 1
509 104.68 temperature 25.0 90 < th dose independent rect. 15 14
516 104.71 wind 9.0 270 < th dose independent rect. 3 11
519 104.73 precipitation 0.1 270 < th dose independent rect. 23 5
522 104.73 precipitation 0.1 270 < th dose dependent rect. 23 5
531 104.79 radiation 20.0 270 < th dose independent rect. 19 14
539 104.85 wind 1.0 270 > th dose independent rect. 1 1
550 104.87 wind 9.0 1440 < th dose independent rect. 2 4
551 104.87 temperature 10.0 1440 > th dose independent rect. 2 4
554 104.87 temperature 30.0 1440 < th dose independent rect. 2 4
558 104.87 humidity 50.0 1440 > th dose independent rect. 2 4
567 104.87 atmosphere 995.0 1440 > th dose independent rect. 2 4
568 104.87 radiation 20.0 1440 < th dose independent rect. 2 4
577 104.87 temperature 10.0 1440 > th dose independent rect. 6 20
581 104.88 temperature 10.0 270 > th dose independent rect. 20 1
582 104.88 temperature 30.0 270 < th dose independent rect. 20 1
583 104.88 humidity 50.0 270 > th dose independent rect. 20 1
586 104.88 atmosphere 995.0 270 > th dose independent rect. 20 1
587 104.88 radiation 1.0 270 < th dose independent rect. 20 1
607 104.88 temperature 10.0 270 > th dose independent rect. 21 23
608 104.88 radiation 1.0 270 < th dose dependent rect. 20 1
626 104.95 wind 9.0 270 < th dose dependent rect. 1 1
631 104.98 humidity 50.0 270 > th dose independent rect. 4 19
632 104.99 humidity 90.0 270 < th dose independent rect. 20 1
638 105.02 temperature 10.0 270 > th dose dependent rect. 19 3
651 105.10 wind 1.0 270 > th dose independent rect. 20 1
657 105.12 atmosphere 1015.0 270 < th dose independent rect. 23 5
660 105.12 wind 9.0 30 < th dose dependent rect. 1 4
664 105.17 precipitation 0.1 270 < th dose independent rect. 20 1
666 105.17 precipitation 0.1 270 < th dose dependent rect. 20 1
673 105.21 wind 5.0 10 < th dose independent rect. 20 14
674 105.21 atmosphere 995.0 30 > th dose independent rect. 1 19
677 105.24 precipitation 0.1 270 < th dose independent rect. 14 13
679 105.24 precipitation 0.1 270 < th dose dependent rect. 14 13
734 105.27 humidity 50.0 30 > th dose dependent rect. 20 5
749 105.31 humidity 90.0 30 < th dose independent rect. 20 5
751 105.31 wind 9.0 270 < th dose dependent rect. 20 1
772 105.34 humidity 90.0 30 > th dose independent sin 8 NA
775 105.34 wind 9.0 270 < th dose dependent rect. 19 3
782 105.38 wind 9.0 90 < th dose dependent rect. 5 20
804 105.51 humidity 80.0 10 > th dose dependent rect. 1 11
816 105.58 wind 7.0 720 < th dose independent rect. 19 12
821 105.59 wind 9.0 270 < th dose independent rect. 22 21
832 105.67 humidity 90.0 30 < th dose independent rect. 17 23
868 105.75 temperature 10.0 30 > th dose dependent rect. 5 20
874 105.79 radiation 30.0 90 < th dose independent rect. 15 14
878 105.81 temperature 25.0 90 > th dose independent rect. 20 5
907 105.88 temperature 30.0 90 < th dose independent rect. 5 10
912 105.89 radiation 20.0 30 < th dose independent rect. 20 14
920 105.90 radiation 40.0 90 < th dose dependent rect. 15 14
930 105.95 radiation 30.0 720 < th dose dependent rect. 4 4
940 105.99 radiation 1.0 30 < th dose dependent sin 3 NA
978 106.05 wind 1.0 270 > th dose independent rect. 8 11
985 106.07 atmosphere 1015.0 270 < th dose independent rect. 19 3
993 106.10 humidity 60.0 270 > th dose independent rect. 19 3