Os10g0359500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os10g0359500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.2 | 0.355 | 8.77 | 0.914 | 0.358 | 0.859 | 0.638 | -0.126 | 0.285 | 18.2 | 72 | 790 | -- | -- |
| 57.22 | 0.352 | 8.77 | 0.905 | 0.358 | 0.856 | 0.684 | -- | 0.282 | 18.2 | 72.06 | 790 | -- | -- |
| 57.91 | 0.354 | 8.76 | 0.941 | 0.337 | 0.834 | -- | -0.44 | 0.297 | 18.7 | 72 | 810 | -- | -- |
| 58.21 | 0.355 | 8.77 | 0.9 | 0.343 | 0.852 | -- | -- | 0.288 | 18.9 | 72.04 | 818 | -- | -- |
| 61.32 | 0.365 | 8.75 | 1.01 | -- | 0.702 | -- | -0.456 | 0.315 | -- | 72 | 957 | -- | -- |
| 71.4 | 0.396 | 8.77 | 0.783 | 0.198 | -- | 0.281 | -- | 0.245 | 12.4 | -- | -- | -- | -- |
| 71.68 | 0.396 | 8.77 | 0.793 | 0.2 | -- | -- | -- | 0.246 | 11.8 | -- | -- | -- | -- |
| 61.06 | 0.364 | 8.76 | 0.888 | -- | 0.603 | -- | -- | 0.297 | -- | 71.99 | 955 | -- | -- |
| 78.97 | 0.414 | 8.79 | -- | 0.25 | 0.685 | -- | -- | 0.183 | 18.4 | 72 | 827 | -- | -- |
| 74.19 | 0.402 | 8.77 | 0.787 | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
| 88.26 | 0.439 | 8.79 | -- | 0.19 | -- | -- | -- | 0.158 | 11.5 | -- | -- | -- | -- |
| 80.48 | 0.418 | 8.78 | -- | -- | 0.547 | -- | -- | 0.19 | -- | 74.19 | 925 | -- | -- |
| 90.53 | 0.444 | 8.79 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.08 | humidity | 70 | 720 | > th | dose independent | rect. | 4 | 21 |
| 4 | 57.42 | humidity | 70 | 720 | > th | dose independent | rect. | 11 | 14 |
| 5 | 57.43 | humidity | 70 | 720 | > th | dose independent | rect. | 13 | 12 |
| 11 | 57.53 | humidity | 70 | 720 | > th | dose independent | rect. | 11 | 21 |
| 45 | 58.09 | humidity | 80 | 720 | < th | dose independent | rect. | 8 | 13 |
| 58 | 58.35 | humidity | 70 | 720 | > th | dose independent | rect. | 4 | 16 |
| 59 | 58.36 | humidity | 70 | 720 | > th | dose independent | no | NA | NA |
| 73 | 58.51 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 77 | 58.54 | humidity | 70 | 720 | > th | dose independent | sin | 17 | NA |
| 79 | 58.55 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 22 |
| 80 | 58.55 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 22 |
| 85 | 58.56 | humidity | 60 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 93 | 58.62 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 23 |
| 102 | 58.68 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 23 |
| 105 | 58.70 | humidity | 70 | 720 | < th | dose independent | rect. | 9 | 22 |
| 106 | 58.70 | humidity | 70 | 720 | > th | dose independent | rect. | 21 | 23 |
| 162 | 58.88 | humidity | 80 | 720 | > th | dose independent | sin | 0 | NA |
| 172 | 58.94 | humidity | 80 | 720 | < th | dose independent | sin | 23 | NA |
| 181 | 58.97 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 182 | 58.97 | humidity | 60 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 231 | 59.08 | humidity | 70 | 720 | < th | dose independent | no | NA | NA |
| 294 | 59.12 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 328 | 59.24 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 343 | 59.28 | humidity | 70 | 720 | < th | dose independent | sin | 19 | NA |
| 368 | 59.35 | humidity | 90 | 720 | < th | dose dependent | rect. | 9 | 12 |
| 404 | 59.46 | humidity | 80 | 720 | > th | dose independent | sin | 22 | NA |
| 419 | 59.50 | humidity | 60 | 720 | > th | dose dependent | rect. | 4 | 16 |
| 437 | 59.55 | humidity | 80 | 720 | < th | dose independent | rect. | 9 | 6 |
| 472 | 59.61 | humidity | 80 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 497 | 59.66 | humidity | 90 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 698 | 59.90 | humidity | 80 | 720 | < th | dose dependent | no | NA | NA |
| 717 | 59.90 | humidity | 80 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 744 | 59.94 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 802 | 60.01 | humidity | 80 | 720 | < th | dose dependent | sin | 11 | NA |
| 807 | 60.02 | humidity | 70 | 720 | > th | dose dependent | sin | 21 | NA |
| 836 | 60.09 | humidity | 70 | 720 | > th | dose dependent | sin | 0 | NA |
| 856 | 60.12 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 873 | 60.16 | humidity | 60 | 720 | > th | dose dependent | sin | 19 | NA |
| 875 | 60.16 | humidity | 90 | 720 | < th | dose dependent | sin | 22 | NA |
| 919 | 60.25 | humidity | 70 | 720 | > th | dose independent | rect. | 11 | 9 |
| 941 | 60.29 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 965 | 60.34 | humidity | 50 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 985 | 60.41 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 8 |