Os10g0357700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0357700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.07 | 0.39 | 8.38 | -0.977 | 0.188 | -0.807 | -0.487 | -1.01 | 0.242 | 18 | 1015 | 4880 | -- | -- |
| 70.39 | 0.391 | 8.4 | -1.02 | 0.186 | -0.583 | -0.517 | -- | 0.233 | 18 | 1014 | 4912 | -- | -- |
| 69.61 | 0.389 | 8.39 | -0.957 | 0.187 | -0.695 | -- | -0.797 | 0.241 | 17.6 | 1014 | 4915 | -- | -- |
| 70.94 | 0.392 | 8.4 | -1.07 | 0.188 | -0.594 | -- | -- | 0.217 | 17.5 | 1014 | 4925 | -- | -- |
| 71.41 | 0.394 | 8.38 | -0.963 | -- | -0.68 | -- | -0.801 | 0.24 | -- | 1014 | 4965 | -- | -- |
| 78.7 | 0.416 | 8.38 | -0.966 | 0.176 | -- | -0.448 | -- | 0.304 | 18.1 | -- | -- | -- | -- |
| 79.16 | 0.417 | 8.38 | -0.961 | 0.176 | -- | -- | -- | 0.303 | 17.6 | -- | -- | -- | -- |
| 72.78 | 0.397 | 8.4 | -1.07 | -- | -0.579 | -- | -- | 0.215 | -- | 1014 | 4976 | -- | -- |
| 99.64 | 0.465 | 8.38 | -- | 0.205 | -0.432 | -- | -- | 0.332 | 16.5 | 1014 | 4491 | -- | -- |
| 80.76 | 0.42 | 8.38 | -0.967 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 103.5 | 0.476 | 8.36 | -- | 0.192 | -- | -- | -- | 0.41 | 17.4 | -- | -- | -- | -- |
| 101.66 | 0.47 | 8.36 | -- | -- | -0.417 | -- | -- | 0.357 | -- | 1014 | 4560 | -- | -- |
| 105.42 | 0.479 | 8.35 | -- | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.97 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 5 | 68.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 17 | 69.00 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 18 | 69.00 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 19 | 69.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 21 | 69.05 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 23 | 69.07 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 58 | 69.09 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 74 | 69.09 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 131 | 69.10 | humidity | 50.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 150 | 69.10 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 165 | 69.11 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 178 | 69.14 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 202 | 69.14 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 209 | 69.16 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 212 | 69.17 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 14 |
| 216 | 69.18 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 217 | 69.18 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 218 | 69.18 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 223 | 69.18 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 268 | 69.22 | humidity | 50.0 | 14400 | < th | dose independent | no | NA | NA |
| 394 | 69.25 | humidity | 50.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 445 | 69.32 | humidity | 50.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 470 | 69.34 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 492 | 69.38 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 494 | 69.38 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 13 | 22 |
| 585 | 69.45 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 605 | 69.47 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 632 | 69.49 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 636 | 69.50 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 638 | 69.50 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 645 | 69.51 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 663 | 69.54 | humidity | 50.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 669 | 69.54 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |
| 838 | 69.57 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 929 | 69.61 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 939 | 69.61 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 975 | 69.62 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |