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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0353100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.1 (0.0182) R2 : 2.68e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00424 (0.0383) R2dN8 : 3.46e-05 R2N8 : 2.68e-05
σ : 0.343
deviance : 53.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.89 0.338 3.11 0.168 0.0751 0.161 -0.0975 0.832 -0.0153 5.85 91 5892 -- --
52.83 0.339 3.11 0.106 0.0953 0.201 -0.115 -- -0.0396 5.91 91.99 5007 -- --
51.9 0.336 3.11 0.17 0.0765 0.161 -- 0.837 -0.0146 6.59 91 5901 -- --
52.81 0.338 3.11 0.108 0.0998 0.209 -- -- -0.0401 7.02 92 5100 -- --
52.2 0.336 3.11 0.169 -- 0.162 -- 0.831 -0.0137 -- 91 5839 -- --
53.32 0.342 3.1 0.099 0.0734 -- -0.137 -- 0.00459 5.46 -- -- -- --
53.34 0.342 3.1 0.0991 0.0758 -- -- -- 0.00539 6.47 -- -- -- --
53.16 0.34 3.11 0.114 -- 0.189 -- -- -0.0338 -- 92 5635 -- --
53.12 0.339 3.11 -- 0.0995 0.199 -- -- -0.044 6.89 88 5100 -- --
53.64 0.342 3.1 0.101 -- -- -- -- 0.00697 -- -- -- -- --
53.6 0.342 3.1 -- 0.0771 -- -- -- -0.00565 6.4 -- -- -- --
53.48 0.341 3.11 -- -- 0.175 -- -- -0.0407 -- 88 5643 -- --
53.91 0.343 3.1 -- -- -- -- -- -0.00424 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.30 humidity 90.0 30 < th dose independent rect. 22 1
2 49.31 humidity 90.0 30 < th dose dependent rect. 22 1
3 49.33 temperature 25.0 30 > th dose dependent rect. 22 1
4 49.33 atmosphere 1005.0 30 > th dose dependent rect. 22 1
5 49.34 wind 9.0 1440 < th dose independent rect. 23 1
6 49.34 temperature 10.0 1440 > th dose independent rect. 23 1
9 49.34 temperature 30.0 1440 < th dose independent rect. 23 1
13 49.34 humidity 50.0 1440 > th dose independent rect. 23 1
23 49.34 atmosphere 1005.0 30 > th dose independent rect. 22 1
24 49.34 atmosphere 995.0 1440 > th dose independent rect. 23 1
25 49.34 radiation 1.0 1440 < th dose independent rect. 23 1
45 49.34 temperature 10.0 1440 > th dose independent rect. 24 23
48 49.34 temperature 10.0 30 > th dose dependent rect. 22 1
51 49.34 radiation 1.0 1440 < th dose dependent rect. 23 1
56 49.35 wind 1.0 30 > th dose independent rect. 22 1
59 49.36 wind 7.0 30 < th dose independent rect. 22 1
61 49.36 temperature 10.0 30 > th dose independent rect. 22 1
64 49.36 temperature 30.0 30 < th dose independent rect. 22 1
65 49.36 humidity 50.0 30 > th dose independent rect. 22 1
68 49.36 atmosphere 995.0 30 > th dose independent rect. 22 1
69 49.36 atmosphere 1010.0 30 < th dose independent rect. 22 1
71 49.36 radiation 1.0 30 < th dose independent rect. 22 1
76 49.36 precipitation 0.1 30 < th dose independent rect. 22 1
77 49.36 temperature 10.0 30 > th dose independent rect. 23 23
78 49.36 radiation 1.0 30 < th dose dependent rect. 22 1
83 49.36 precipitation 0.1 30 < th dose dependent rect. 22 1
87 49.38 wind 9.0 30 < th dose dependent rect. 22 1
89 49.41 wind 1.0 30 > th dose dependent rect. 22 1
90 49.41 humidity 50.0 30 > th dose dependent rect. 22 1
98 49.48 atmosphere 1015.0 30 < th dose dependent rect. 22 1
101 49.57 temperature 30.0 30 < th dose dependent rect. 22 1
104 49.63 atmosphere 1005.0 90 > th dose dependent rect. 2 1
108 49.68 wind 9.0 30 < th dose independent rect. 23 23
113 49.75 atmosphere 1005.0 10 > th dose dependent rect. 2 2
159 50.20 atmosphere 1005.0 90 > th dose independent rect. 2 1
162 50.28 atmosphere 1000.0 90 > th dose independent rect. 3 23
164 50.34 wind 3.0 90 < th dose independent rect. 2 1
167 50.39 radiation 1.0 43200 < th dose dependent rect. 3 1
168 50.41 wind 5.0 90 < th dose dependent rect. 2 1
170 50.45 temperature 20.0 30 > th dose dependent rect. 2 1
171 50.46 temperature 20.0 30 > th dose independent rect. 2 1
194 50.50 wind 9.0 1440 < th dose independent rect. 3 1
195 50.50 temperature 10.0 1440 > th dose independent rect. 3 1
198 50.50 temperature 30.0 1440 < th dose independent rect. 3 1
202 50.50 humidity 50.0 1440 > th dose independent rect. 3 1
211 50.50 atmosphere 995.0 1440 > th dose independent rect. 3 1
212 50.50 radiation 1.0 1440 < th dose independent rect. 3 1
232 50.50 temperature 10.0 1440 > th dose independent rect. 4 23
251 50.52 temperature 10.0 30 > th dose independent rect. 2 1
253 50.52 temperature 30.0 30 < th dose independent rect. 2 1
254 50.52 humidity 50.0 30 > th dose independent rect. 2 1
258 50.52 atmosphere 1010.0 30 < th dose independent rect. 2 1
260 50.52 radiation 1.0 30 < th dose independent rect. 2 1
265 50.52 precipitation 0.1 30 < th dose independent rect. 2 1
266 50.52 temperature 10.0 30 > th dose independent rect. 3 23
268 50.52 humidity 50.0 30 > th dose dependent rect. 2 1
271 50.52 radiation 1.0 30 < th dose dependent rect. 2 1
276 50.52 precipitation 0.1 30 < th dose dependent rect. 2 1
279 50.53 humidity 90.0 90 < th dose independent rect. 2 1
288 50.59 wind 1.0 30 > th dose independent rect. 2 1
289 50.59 atmosphere 1015.0 30 < th dose dependent rect. 2 1
292 50.61 temperature 30.0 30 < th dose dependent rect. 2 1
335 50.71 precipitation 0.1 90 < th dose independent rect. 3 23
336 50.71 precipitation 0.1 90 < th dose dependent rect. 3 23
382 50.83 atmosphere 995.0 720 > th dose independent rect. 23 16
384 50.85 temperature 25.0 30 > th dose independent rect. 20 3
391 50.89 temperature 10.0 720 > th dose independent rect. 15 8
392 50.89 precipitation 0.1 720 < th dose independent rect. 15 8
393 50.89 temperature 10.0 720 > th dose independent rect. 23 16
394 50.89 precipitation 0.1 720 < th dose dependent rect. 15 8
398 50.93 atmosphere 995.0 30 > th dose independent rect. 23 23
401 50.95 temperature 10.0 720 > th dose independent rect. 3 8
402 50.95 atmosphere 995.0 720 > th dose independent rect. 3 8
403 50.95 temperature 10.0 720 > th dose independent rect. 11 16
407 50.96 temperature 25.0 30 > th dose dependent rect. 20 3
410 50.99 wind 9.0 720 < th dose independent rect. 3 8
411 50.99 wind 9.0 30 < th dose independent rect. 3 23
416 51.05 atmosphere 1015.0 720 < th dose independent rect. 3 8
417 51.05 radiation 40.0 720 < th dose independent rect. 15 8
421 51.06 atmosphere 1005.0 30 > th dose dependent rect. 20 3
426 51.09 humidity 50.0 30 > th dose independent rect. 3 23
428 51.13 humidity 50.0 720 > th dose independent rect. 3 8
430 51.15 precipitation 0.1 720 < th dose independent rect. 11 16
433 51.15 precipitation 0.1 720 < th dose dependent rect. 11 16
461 51.35 atmosphere 1000.0 10 > th dose independent rect. 21 23
464 51.38 wind 9.0 720 < th dose independent rect. 15 8
477 51.45 humidity 60.0 10 > th dose independent rect. 14 12
480 51.46 humidity 90.0 30 < th dose independent rect. 20 3
505 51.48 radiation 40.0 30 < th dose independent rect. 14 12
516 51.49 atmosphere 995.0 720 > th dose independent rect. 15 8
521 51.51 atmosphere 995.0 720 > th dose independent rect. 11 16
524 51.52 precipitation 0.1 720 < th dose independent rect. 3 8
527 51.52 precipitation 0.1 720 < th dose dependent rect. 3 8
530 51.53 precipitation 0.1 720 < th dose independent rect. 23 16
532 51.53 precipitation 0.1 720 < th dose dependent rect. 23 16
539 51.55 humidity 90.0 10 < th dose dependent rect. 20 1
571 51.58 radiation 1.0 1440 < th dose dependent rect. 21 1
574 51.59 atmosphere 1000.0 10 > th dose independent rect. 2 12
581 51.60 radiation 40.0 10 < th dose dependent rect. 14 12
582 51.61 atmosphere 1000.0 10 > th dose independent rect. 14 12
584 51.62 atmosphere 1005.0 30 > th dose independent rect. 20 3
587 51.62 atmosphere 995.0 720 > th dose independent rect. 15 23
589 51.63 atmosphere 1005.0 10 > th dose independent rect. 20 1
623 51.63 wind 9.0 720 < th dose dependent rect. 2 1
626 51.64 humidity 90.0 10 < th dose independent rect. 20 1
630 51.65 atmosphere 1000.0 10 > th dose independent rect. 2 14
632 51.66 temperature 20.0 10 > th dose independent rect. 20 1
634 51.66 atmosphere 995.0 720 > th dose independent rect. 3 23
636 51.66 humidity 80.0 14400 < th dose dependent rect. 4 5
638 51.67 wind 7.0 10 < th dose independent rect. 20 1
639 51.67 precipitation 0.1 720 < th dose independent rect. 14 1
640 51.67 temperature 10.0 10 > th dose independent rect. 2 12
642 51.67 temperature 10.0 10 > th dose independent rect. 14 12
644 51.67 atmosphere 1015.0 10 < th dose independent rect. 2 12
645 51.67 temperature 30.0 30 < th dose dependent rect. 20 1
646 51.67 precipitation 0.1 720 < th dose dependent rect. 14 1
648 51.67 temperature 25.0 720 > th dose dependent rect. 3 5
649 51.67 humidity 90.0 10 < th dose dependent rect. 20 14
650 51.68 wind 1.0 10 > th dose independent rect. 20 1
653 51.68 temperature 10.0 10 > th dose independent rect. 20 1
655 51.68 temperature 30.0 10 < th dose independent rect. 20 1
656 51.68 humidity 50.0 10 > th dose independent rect. 20 1
660 51.68 atmosphere 995.0 10 > th dose independent rect. 20 1
662 51.68 atmosphere 1010.0 10 < th dose independent rect. 20 1
664 51.68 radiation 1.0 10 < th dose independent rect. 20 1
669 51.68 precipitation 0.1 10 < th dose independent rect. 20 1
671 51.68 temperature 10.0 10 > th dose independent rect. 21 23
672 51.68 wind 9.0 10 < th dose dependent rect. 20 1
673 51.68 atmosphere 995.0 10 > th dose dependent rect. 20 1
674 51.68 radiation 1.0 10 < th dose dependent rect. 20 1
679 51.68 precipitation 0.1 10 < th dose dependent rect. 20 1
690 51.69 temperature 10.0 10 > th dose dependent rect. 20 1
696 51.70 wind 1.0 720 > th dose independent rect. 14 1
707 51.70 atmosphere 1015.0 10 < th dose dependent rect. 20 1
727 51.71 atmosphere 1000.0 10 > th dose independent rect. 16 10
728 51.71 wind 9.0 30 < th dose independent rect. 14 12
746 51.72 temperature 10.0 720 > th dose independent rect. 14 1
754 51.72 atmosphere 1015.0 720 < th dose independent rect. 14 1
763 51.72 humidity 50.0 10 > th dose independent rect. 16 10
765 51.72 radiation 30.0 10 < th dose independent rect. 16 10
766 51.72 temperature 10.0 1440 > th dose independent rect. 3 12
769 51.72 temperature 10.0 1440 > th dose independent rect. 15 12
773 51.72 precipitation 0.1 30 < th dose independent rect. 2 12
774 51.72 precipitation 0.1 30 < th dose independent rect. 14 12
775 51.72 humidity 90.0 90 < th dose independent rect. 1 22
776 51.72 temperature 10.0 720 > th dose independent rect. 15 23
790 51.72 precipitation 0.1 30 < th dose dependent rect. 2 12
791 51.72 precipitation 0.1 30 < th dose dependent rect. 14 12
792 51.73 precipitation 0.1 720 < th dose independent rect. 2 1
793 51.73 temperature 10.0 10 > th dose independent rect. 16 10
794 51.73 atmosphere 995.0 10 > th dose independent rect. 10 10
800 51.73 temperature 10.0 10 > th dose independent rect. 2 14
802 51.73 atmosphere 1015.0 10 < th dose independent rect. 2 14
803 51.73 wind 9.0 720 < th dose independent rect. 23 16
804 51.73 wind 1.0 10 > th dose dependent rect. 20 1
807 51.73 humidity 50.0 30 > th dose dependent rect. 20 1
810 51.73 precipitation 0.1 720 < th dose dependent rect. 2 1
815 51.74 atmosphere 995.0 720 > th dose independent rect. 14 1
818 51.74 temperature 30.0 30 < th dose independent rect. 2 14
827 51.74 temperature 20.0 30 > th dose dependent rect. 20 7
831 51.75 temperature 25.0 30 > th dose independent rect. 24 11
833 51.75 temperature 30.0 30 < th dose independent rect. 2 12
845 51.76 temperature 10.0 1440 > th dose independent rect. 21 1
848 51.76 temperature 30.0 1440 < th dose independent rect. 21 1
852 51.76 humidity 50.0 1440 > th dose independent rect. 21 1
858 51.76 atmosphere 995.0 1440 > th dose independent rect. 21 1
859 51.76 radiation 1.0 1440 < th dose independent rect. 21 1
881 51.76 temperature 30.0 10 < th dose independent rect. 16 10
883 51.76 precipitation 0.1 10 < th dose independent rect. 16 10
885 51.76 temperature 30.0 10 < th dose independent rect. 14 12
888 51.76 temperature 10.0 1440 > th dose independent rect. 22 23
891 51.76 precipitation 0.1 30 < th dose independent rect. 21 23
896 51.76 precipitation 0.1 10 < th dose dependent rect. 16 10
898 51.76 precipitation 0.1 30 < th dose dependent rect. 21 23
910 51.78 wind 9.0 10 < th dose independent rect. 16 10
913 51.78 wind 9.0 10 < th dose independent rect. 2 12
916 51.78 precipitation 0.1 10 < th dose independent rect. 2 14
917 51.78 wind 1.0 10 > th dose independent rect. 21 23
926 51.78 precipitation 0.1 10 < th dose dependent rect. 2 14
933 51.80 wind 9.0 720 < th dose independent rect. 14 1
946 51.80 atmosphere 995.0 30 > th dose dependent rect. 4 15
958 51.81 wind 5.0 10 > th dose dependent rect. 24 11
967 51.82 atmosphere 995.0 1440 > th dose independent rect. 3 12
971 51.82 precipitation 0.1 720 < th dose independent rect. 3 23
972 51.82 wind 1.0 14400 < th dose dependent rect. 6 1
979 51.82 radiation 1.0 90 < th dose dependent rect. 5 23
980 51.82 precipitation 0.1 720 < th dose dependent rect. 3 23
981 51.83 temperature 25.0 270 > th dose independent rect. 6 1
983 51.83 humidity 90.0 720 < th dose independent rect. 1 3
996 51.84 wind 9.0 720 < th dose independent rect. 11 16