Os10g0352200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0352200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.3 | 0.441 | 3.36 | 1.05 | 0.217 | -0.8 | -0.0537 | 4.61 | -0.127 | 4.19 | 31.69 | 1231 | -- | -- |
| 89.73 | 0.441 | 3.44 | 0.331 | 0.215 | -0.296 | -0.0422 | -- | -0.07 | 3.75 | 26.6 | 2490 | -- | -- |
| 88.28 | 0.438 | 3.36 | 1.08 | 0.218 | -0.825 | -- | 4.85 | -0.127 | 4.31 | 32.25 | 1281 | -- | -- |
| 89.21 | 0.44 | 3.45 | 0.329 | 0.2 | -0.292 | -- | -- | -0.12 | 3.83 | 33.4 | 2048 | -- | -- |
| 90.59 | 0.443 | 3.36 | 0.999 | -- | -0.849 | -- | 4.98 | -0.132 | -- | 32.5 | 1969 | -- | -- |
| 92.79 | 0.452 | 3.44 | 0.246 | 0.197 | -- | -0.149 | -- | -0.0762 | 4.9 | -- | -- | -- | -- |
| 92.84 | 0.451 | 3.44 | 0.246 | 0.196 | -- | -- | -- | -0.0755 | 4.77 | -- | -- | -- | -- |
| 91.59 | 0.446 | 3.45 | 0.314 | -- | -0.271 | -- | -- | -0.116 | -- | 33.4 | 2027 | -- | -- |
| 91.65 | 0.446 | 3.45 | -- | 0.211 | -0.237 | -- | -- | -0.146 | 4.05 | 33.7 | 2040 | -- | -- |
| 94.88 | 0.455 | 3.44 | 0.253 | -- | -- | -- | -- | -0.0704 | -- | -- | -- | -- | -- |
| 94.44 | 0.455 | 3.44 | -- | 0.2 | -- | -- | -- | -0.103 | 4.73 | -- | -- | -- | -- |
| 94.13 | 0.452 | 3.45 | -- | -- | -0.223 | -- | -- | -0.142 | -- | 33.69 | 1976 | -- | -- |
| 96.57 | 0.459 | 3.44 | -- | -- | -- | -- | -- | -0.0985 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.03 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 2 | 85.08 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 4 | 85.24 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 7 | 85.25 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 9 | 85.27 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 10 | 85.28 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 14 | 85.31 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 19 | 85.34 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 20 | 85.35 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 47 | 85.36 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 62 | 85.45 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 133 | 85.67 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 135 | 85.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 152 | 85.77 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 392 | 86.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 421 | 86.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 423 | 86.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 424 | 86.28 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 439 | 86.31 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 441 | 86.31 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 465 | 86.44 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 481 | 86.52 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 509 | 86.63 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 563 | 86.79 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 565 | 86.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 567 | 86.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 578 | 86.82 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 636 | 86.97 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 641 | 86.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 20 |
| 662 | 87.02 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 678 | 87.02 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 684 | 87.04 | wind | 7.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 706 | 87.06 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 16 |
| 725 | 87.07 | wind | 1.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 726 | 87.07 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 732 | 87.07 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 16 |
| 766 | 87.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 783 | 87.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 842 | 87.16 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 19 |
| 880 | 87.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 893 | 87.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 894 | 87.18 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 19 | 22 |
| 929 | 87.20 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 957 | 87.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 982 | 87.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 987 | 87.22 | wind | 7.0 | 43200 | < th | dose dependent | no | NA | NA |