Os10g0352000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0352000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 559.88 | 1.11 | 6.26 | 5.41 | 0.195 | 214 | 0.151 | 445 | -0.125 | 8.38 | 14.99 | 4473 | -- | -- |
| 574.53 | 1.12 | 3.26 | -1.39 | 0.177 | 2.27 | 0.389 | -- | -0.227 | 7.74 | 14.99 | 4473 | -- | -- |
| 559.57 | 1.1 | 6.31 | 5.49 | 0.186 | 222 | -- | 462 | -0.142 | 8.52 | 14.96 | 4473 | -- | -- |
| 574.87 | 1.12 | 3.26 | -1.37 | 0.179 | 2.33 | -- | -- | -0.225 | 8.62 | 14.96 | 4473 | -- | -- |
| 561.49 | 1.1 | 6.3 | 5.46 | -- | 223 | -- | 464 | -0.127 | -- | 14.96 | 4472 | -- | -- |
| 584.47 | 1.13 | 3.26 | -1.48 | 0.157 | -- | 0.577 | -- | -0.248 | 7.65 | -- | -- | -- | -- |
| 585.4 | 1.13 | 3.26 | -1.46 | 0.157 | -- | -- | -- | -0.249 | 7.86 | -- | -- | -- | -- |
| 574.12 | 1.12 | 3.23 | -0.94 | -- | 1.25 | -- | -- | -0.0278 | -- | 20.5 | 2792 | -- | -- |
| 584.88 | 1.13 | 3.18 | -- | 0.131 | 1.39 | -- | -- | 0.125 | 8.48 | 19.43 | 17442 | -- | -- |
| 586.74 | 1.13 | 3.27 | -1.46 | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
| 641.72 | 1.18 | 3.23 | -- | 0.149 | -- | -- | -- | -0.0861 | 8.56 | -- | -- | -- | -- |
| 582.29 | 1.12 | 3.17 | -- | -- | 1.42 | -- | -- | 0.145 | -- | 18.99 | 39982 | -- | -- |
| 642.97 | 1.18 | 3.23 | -- | -- | -- | -- | -- | -0.0847 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 548.77 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 548.77 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 550.63 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 9 |
| 25 | 551.14 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 5 |
| 67 | 551.81 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 17 |
| 72 | 552.41 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 85 | 552.62 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 89 | 552.90 | humidity | 90 | 270 | > th | dose independent | rect. | 15 | 1 |
| 90 | 552.90 | humidity | 90 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 95 | 553.12 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 99 | 553.75 | radiation | 10 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 100 | 553.84 | radiation | 10 | 270 | < th | dose dependent | rect. | 9 | 7 |
| 102 | 554.19 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 7 |
| 133 | 554.89 | radiation | 10 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 152 | 555.13 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 10 | 1 |
| 179 | 556.47 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 181 | 556.62 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 186 | 556.84 | humidity | 90 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 189 | 556.98 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 200 | 557.10 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 5 |
| 205 | 557.20 | humidity | 90 | 270 | > th | dose independent | rect. | 12 | 4 |
| 226 | 557.72 | temperature | 25 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 258 | 558.68 | radiation | 10 | 270 | < th | dose independent | rect. | 14 | 1 |
| 260 | 559.07 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 265 | 559.10 | temperature | 15 | 4320 | < th | dose dependent | rect. | 19 | 12 |
| 276 | 559.22 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 10 | 12 |
| 287 | 559.36 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 8 | 12 |
| 291 | 559.51 | temperature | 15 | 4320 | < th | dose dependent | rect. | 15 | 16 |
| 294 | 559.54 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 10 |
| 318 | 559.75 | radiation | 10 | 270 | < th | dose dependent | rect. | 20 | 21 |
| 319 | 559.79 | temperature | 15 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 326 | 559.82 | temperature | 15 | 4320 | < th | dose dependent | sin | 10 | NA |
| 381 | 560.39 | temperature | 15 | 4320 | < th | dose dependent | rect. | 2 | 23 |
| 386 | 560.41 | temperature | 15 | 4320 | < th | dose dependent | rect. | 19 | 18 |
| 409 | 560.57 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 429 | 560.63 | temperature | 15 | 10 | > th | dose independent | rect. | 12 | 14 |
| 430 | 560.63 | temperature | 15 | 4320 | < th | dose dependent | rect. | 19 | 22 |
| 449 | 560.72 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 452 | 560.73 | temperature | 15 | 4320 | < th | dose dependent | rect. | 15 | 22 |
| 460 | 560.78 | radiation | 40 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 478 | 560.90 | wind | 5 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 502 | 561.01 | temperature | 15 | 4320 | < th | dose dependent | no | NA | NA |
| 545 | 561.19 | temperature | 25 | 270 | < th | dose independent | rect. | 14 | 1 |
| 580 | 561.59 | atmosphere | 1005 | 270 | < th | dose dependent | sin | 23 | NA |
| 589 | 561.67 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 7 |
| 592 | 561.69 | radiation | 40 | 10 | < th | dose independent | rect. | 9 | 17 |
| 595 | 561.70 | wind | 9 | 90 | > th | dose independent | sin | 12 | NA |
| 604 | 561.80 | radiation | 40 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 645 | 562.05 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 15 |
| 650 | 562.15 | wind | 9 | 90 | < th | dose independent | sin | 12 | NA |
| 665 | 562.26 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 671 | 562.29 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 694 | 562.34 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 4 | 2 |
| 695 | 562.35 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 745 | 562.75 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 4 | 1 |
| 779 | 562.96 | humidity | 80 | 10 | > th | dose dependent | rect. | 12 | 7 |
| 816 | 563.02 | wind | 5 | 10 | < th | dose independent | rect. | 16 | 1 |
| 841 | 563.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 869 | 563.22 | radiation | 40 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 885 | 563.22 | radiation | 40 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 905 | 563.26 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 915 | 563.34 | wind | 9 | 90 | > th | dose dependent | sin | 13 | NA |
| 936 | 563.50 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 3 |
| 937 | 563.51 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 944 | 563.54 | atmosphere | 1005 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 952 | 563.56 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 6 |
| 953 | 563.56 | radiation | 40 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 960 | 563.59 | radiation | 40 | 10 | < th | dose independent | rect. | 9 | 6 |
| 962 | 563.60 | temperature | 15 | 4320 | < th | dose dependent | rect. | 22 | 3 |
| 968 | 563.62 | wind | 3 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 991 | 563.70 | radiation | 40 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 996 | 563.71 | radiation | 10 | 10 | > th | dose independent | rect. | 15 | 18 |