Os10g0348900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0348900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.69 | 0.696 | 6.38 | -0.0333 | 2.01 | -1.83 | -1.62 | 5.35 | 0.599 | 22.7 | 19.46 | 3830 | -- | -- |
| 217.33 | 0.687 | 6.47 | -0.415 | 2 | -2.63 | -1.01 | -- | 0.727 | 22.4 | 12.41 | 10637 | -- | -- |
| 224.84 | 0.698 | 6.38 | 0.144 | 2.16 | -2.03 | -- | 6.24 | 0.704 | 22.6 | 22.16 | 2380 | -- | -- |
| 221.31 | 0.693 | 6.5 | -0.743 | 1.93 | -2.49 | -- | -- | 0.617 | 22.7 | 11.03 | 10259 | -- | -- |
| 399.15 | 0.936 | 6.45 | -0.925 | -- | -2.54 | -- | 4.62 | 0.433 | -- | 18.24 | 5912 | -- | -- |
| 313.97 | 0.831 | 6.67 | -2.25 | 1.87 | -- | -1.46 | -- | -0.168 | 22.5 | -- | -- | -- | -- |
| 322.76 | 0.841 | 6.67 | -2.19 | 1.87 | -- | -- | -- | -0.165 | 22.6 | -- | -- | -- | -- |
| 421.03 | 0.96 | 6.54 | -1.64 | -- | -2.85 | -- | -- | 0.224 | -- | 10.25 | 11679 | -- | -- |
| 228.63 | 0.704 | 6.41 | -- | 1.97 | -2.75 | -- | -- | 0.974 | 22.7 | 10.53 | 15340 | -- | -- |
| 538.32 | 1.08 | 6.62 | -2.16 | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
| 449.66 | 0.992 | 6.62 | -- | 1.86 | -- | -- | -- | 0.0797 | 22.5 | -- | -- | -- | -- |
| 452.11 | 0.99 | 6.37 | -- | -- | -2.7 | -- | -- | 0.954 | -- | 7.008 | 14565 | -- | -- |
| 661.41 | 1.2 | 6.57 | -- | -- | -- | -- | -- | 0.0837 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.96 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 3 | 204.47 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 8 | 206.36 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 11 | 206.63 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 15 |
| 14 | 206.79 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 19 | 206.89 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 22 | 206.98 | humidity | 90 | 14400 | > th | dose dependent | sin | 16 | NA |
| 32 | 207.21 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 16 |
| 52 | 207.54 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 67 | 207.75 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 81 | 208.03 | humidity | 90 | 14400 | > th | dose independent | sin | 16 | NA |
| 83 | 208.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 97 | 208.35 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 110 | 208.57 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 115 | 208.62 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 144 | 209.16 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 151 | 209.27 | humidity | 90 | 14400 | < th | dose independent | rect. | 10 | 17 |
| 152 | 209.28 | humidity | 90 | 14400 | < th | dose independent | rect. | 12 | 15 |
| 154 | 209.30 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 190 | 209.68 | humidity | 90 | 14400 | < th | dose independent | sin | 17 | NA |
| 209 | 209.86 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 219 | 209.98 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 228 | 210.03 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 232 | 210.04 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 21 |
| 265 | 210.25 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 290 | 210.42 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 296 | 210.45 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 301 | 210.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 378 | 210.93 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 410 | 211.13 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 413 | 211.15 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 416 | 211.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 439 | 211.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 442 | 211.35 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 461 | 211.48 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 494 | 211.64 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 522 | 211.82 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 533 | 211.86 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 540 | 211.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 557 | 211.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 573 | 212.00 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 23 |
| 575 | 212.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 642 | 212.34 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 651 | 212.38 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 655 | 212.39 | humidity | 80 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 657 | 212.40 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 679 | 212.52 | wind | 5 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 808 | 213.09 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 22 |
| 814 | 213.13 | wind | 3 | 43200 | > th | dose independent | sin | 5 | NA |
| 819 | 213.14 | temperature | 25 | 14400 | < th | dose dependent | sin | 20 | NA |
| 829 | 213.20 | humidity | 80 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 853 | 213.28 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 904 | 213.45 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 912 | 213.50 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 943 | 213.63 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 948 | 213.67 | wind | 3 | 43200 | < th | dose independent | sin | 5 | NA |
| 949 | 213.67 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 976 | 213.78 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 17 |