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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0348600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF594 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0429) R2 : 0.00626
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.153 (0.0904) R2dN8 : 0.00808 R2N8 : 0.00626
σ : 0.808
deviance : 299.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
274.87 0.779 3.08 0.378 0.329 4.7 0.0466 13.8 0.208 10.4 10.2 499 -- --
282.12 0.782 3.03 0.298 0.276 1.99 0.127 -- 0.226 9.49 10.3 506 -- --
274.87 0.772 3.08 0.384 0.327 4.8 -- 14.2 0.21 10.5 10.25 498 -- --
281.84 0.782 3.04 0.275 0.307 2.01 -- -- 0.212 10.2 10.3 498 -- --
281.19 0.781 3.09 0.396 -- 5.1 -- 16 0.206 -- 10.38 498 -- --
295.27 0.806 3.05 0.157 0.256 -- 0.0283 -- 0.172 10.8 -- -- -- --
295.28 0.805 3.05 0.158 0.255 -- -- -- 0.172 10.9 -- -- -- --
287.44 0.79 3.04 0.25 -- 1.86 -- -- 0.213 -- 10.3 503 -- --
283.6 0.784 3.04 -- 0.302 1.89 -- -- 0.186 10.1 10.3 506 -- --
299.32 0.808 3.05 0.153 -- -- -- -- 0.17 -- -- -- -- --
295.94 0.805 3.05 -- 0.254 -- -- -- 0.154 10.8 -- -- -- --
289.06 0.792 3.05 -- -- 1.76 -- -- 0.184 -- 10.3 499 -- --
299.94 0.808 3.06 -- -- -- -- -- 0.153 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 271.25 wind 3.0 10 < th dose independent rect. 7 1
3 273.97 wind 7.0 10 > th dose independent rect. 16 18
4 274.01 wind 7.0 10 > th dose independent rect. 16 6
19 275.45 wind 7.0 720 < th dose independent rect. 13 7
22 275.75 wind 7.0 720 > th dose dependent rect. 14 1
24 275.89 wind 7.0 720 > th dose independent rect. 14 1
26 276.34 wind 5.0 90 < th dose independent rect. 8 21
27 276.40 wind 7.0 720 < th dose independent rect. 23 20
28 276.49 wind 3.0 10 < th dose dependent rect. 7 2
32 276.81 wind 5.0 90 < th dose independent rect. 8 11
35 276.92 wind 7.0 720 < th dose independent rect. 22 22
37 276.93 wind 7.0 1440 < th dose independent rect. 14 1
38 276.95 wind 7.0 720 < th dose independent rect. 8 10
41 277.10 temperature 30.0 270 > th dose independent rect. 13 1
42 277.22 wind 7.0 270 < th dose independent rect. 15 12
45 277.37 wind 7.0 720 < th dose independent rect. 6 14
54 277.59 humidity 50.0 10 > th dose independent rect. 17 23
55 277.60 atmosphere 1010.0 10 < th dose independent rect. 6 2
58 277.67 wind 7.0 720 < th dose independent rect. 15 4
59 277.67 wind 9.0 720 < th dose independent rect. 6 23
61 277.74 radiation 10.0 90 < th dose independent rect. 6 1
67 277.98 wind 7.0 30 < th dose independent rect. 17 11
76 278.28 wind 7.0 720 < th dose independent rect. 17 1
78 278.34 wind 7.0 720 < th dose independent rect. 8 19
84 278.47 atmosphere 1005.0 30 > th dose independent rect. 14 3
91 278.61 atmosphere 1005.0 30 > th dose dependent rect. 14 3
93 278.63 wind 9.0 90 < th dose dependent rect. 8 11
105 279.02 wind 5.0 10 > th dose independent rect. 14 9
107 279.06 wind 9.0 720 < th dose dependent rect. 17 1
110 279.13 wind 7.0 10 > th dose independent sin 12 NA
111 279.13 wind 7.0 30 > th dose independent rect. 19 15
115 279.19 wind 5.0 30 > th dose dependent rect. 16 18
130 279.50 wind 7.0 90 > th dose dependent rect. 8 1
131 279.51 radiation 1.0 30 > th dose independent rect. 7 1
133 279.53 wind 7.0 720 < th dose independent rect. 13 15
134 279.54 atmosphere 1005.0 10 > th dose independent rect. 16 1
137 279.56 wind 7.0 30 > th dose independent rect. 16 1
139 279.61 wind 7.0 90 > th dose independent rect. 8 1
142 279.64 atmosphere 1005.0 30 > th dose dependent rect. 16 1
143 279.65 radiation 10.0 10 < th dose independent rect. 16 1
146 279.69 temperature 30.0 30 < th dose independent rect. 16 1
149 279.71 humidity 60.0 30 > th dose independent rect. 16 1
158 279.79 humidity 50.0 30 > th dose dependent rect. 16 1
165 279.85 wind 7.0 30 < th dose independent sin 12 NA
171 280.01 wind 5.0 10 > th dose dependent rect. 16 1
184 280.13 wind 7.0 720 > th dose dependent rect. 13 5
186 280.16 temperature 30.0 30 < th dose dependent rect. 16 1
200 280.30 humidity 90.0 10 < th dose independent rect. 7 1
206 280.34 wind 5.0 10 > th dose dependent rect. 16 6
207 280.35 wind 9.0 720 < th dose dependent rect. 15 4
211 280.36 wind 7.0 30 > th dose independent rect. 19 3
224 280.42 wind 9.0 720 > th dose dependent rect. 17 2
228 280.45 radiation 1.0 90 > th dose independent rect. 4 4
245 280.52 humidity 80.0 30 > th dose independent rect. 7 2
253 280.55 radiation 20.0 90 > th dose independent rect. 14 18
257 280.60 wind 7.0 10 > th dose independent rect. 19 1
261 280.60 wind 7.0 10 > th dose dependent rect. 19 1
276 280.67 wind 9.0 720 > th dose independent rect. 17 2
292 280.78 radiation 10.0 10 < th dose dependent rect. 16 1
297 280.80 atmosphere 1000.0 90 < th dose independent rect. 21 2
307 280.89 wind 7.0 720 < th dose independent rect. 8 17
310 280.90 wind 5.0 30 > th dose dependent rect. 14 20
312 280.91 temperature 30.0 30 < th dose independent rect. 14 18
319 280.95 radiation 1.0 30 > th dose dependent rect. 14 18
339 281.05 wind 5.0 90 > th dose independent rect. 13 22
344 281.07 wind 5.0 10 > th dose independent rect. 14 3
350 281.11 wind 5.0 10 > th dose independent rect. 14 21
352 281.12 radiation 40.0 270 > th dose independent rect. 13 1
358 281.14 wind 9.0 10 < th dose dependent rect. 8 23
376 281.26 wind 7.0 720 > th dose independent rect. 13 5
378 281.26 wind 9.0 720 > th dose dependent rect. 11 7
409 281.45 wind 9.0 720 > th dose dependent rect. 14 20
410 281.46 wind 7.0 30 < th dose independent rect. 17 21
415 281.48 atmosphere 1000.0 10 > th dose independent rect. 17 23
418 281.50 temperature 25.0 30 > th dose independent rect. 14 3
430 281.53 radiation 20.0 90 > th dose independent rect. 16 15
455 281.59 wind 7.0 30 < th dose independent rect. 17 23
459 281.60 wind 9.0 720 > th dose dependent sin 16 NA
460 281.61 temperature 25.0 10 > th dose independent rect. 16 1
462 281.61 wind 3.0 10 > th dose dependent rect. 14 9
472 281.63 radiation 1.0 10 > th dose independent rect. 16 1
477 281.68 humidity 80.0 10 < th dose independent rect. 16 1
490 281.71 precipitation 0.1 10 < th dose independent rect. 7 1
493 281.71 precipitation 0.1 10 < th dose dependent rect. 7 1
511 281.75 wind 5.0 10 > th dose independent rect. 12 11
513 281.77 radiation 40.0 270 > th dose independent sin 15 NA
535 281.85 humidity 50.0 30 > th dose dependent rect. 7 1
537 281.87 radiation 30.0 10 < th dose independent rect. 16 1
540 281.88 temperature 10.0 10 > th dose dependent rect. 7 1
541 281.89 atmosphere 995.0 10 > th dose dependent rect. 7 1
560 281.93 atmosphere 1000.0 30 > th dose independent rect. 17 11
567 281.93 wind 7.0 90 < th dose dependent rect. 8 21
588 281.97 wind 5.0 10 > th dose independent sin 16 NA
596 281.99 wind 9.0 10 < th dose independent rect. 16 1
597 281.99 temperature 10.0 10 > th dose independent rect. 16 1
599 281.99 atmosphere 1010.0 10 < th dose independent rect. 16 1
602 281.99 precipitation 0.1 10 < th dose independent rect. 16 1
604 281.99 temperature 10.0 10 > th dose independent rect. 17 23
605 281.99 precipitation 0.1 10 < th dose dependent rect. 16 1
647 282.04 radiation 1.0 30 > th dose dependent rect. 16 16
648 282.05 atmosphere 1000.0 10 < th dose independent rect. 21 3
652 282.07 temperature 10.0 10 > th dose independent rect. 7 1
654 282.07 temperature 30.0 10 < th dose independent rect. 7 1
655 282.07 humidity 50.0 10 > th dose independent rect. 7 1
657 282.07 atmosphere 995.0 10 > th dose independent rect. 7 1
660 282.07 temperature 10.0 10 > th dose independent rect. 8 23
672 282.10 wind 9.0 720 > th dose dependent rect. 11 23
678 282.13 precipitation 0.1 90 < th dose independent rect. 19 13
679 282.13 precipitation 0.1 90 < th dose dependent rect. 19 13
693 282.15 radiation 20.0 90 > th dose independent sin 13 NA
736 282.21 wind 1.0 10 > th dose independent rect. 7 1
742 282.21 wind 1.0 90 < th dose independent rect. 6 6
750 282.23 temperature 10.0 90 > th dose independent rect. 8 11
751 282.23 atmosphere 1015.0 90 < th dose independent rect. 8 11
753 282.23 temperature 10.0 90 > th dose independent rect. 19 13
754 282.23 temperature 30.0 90 < th dose independent rect. 19 13
755 282.23 humidity 50.0 90 > th dose independent rect. 19 13
757 282.23 atmosphere 995.0 90 > th dose independent rect. 19 13
758 282.23 temperature 10.0 10 > th dose dependent rect. 16 1
760 282.24 radiation 40.0 10 < th dose independent rect. 7 1
767 282.25 wind 7.0 720 < th dose independent rect. 15 20
768 282.25 precipitation 0.1 10 < th dose independent rect. 17 23
770 282.25 precipitation 0.1 10 < th dose dependent rect. 17 23
779 282.26 temperature 20.0 90 > th dose independent rect. 8 11
792 282.27 wind 9.0 1440 < th dose independent rect. 8 1
795 282.27 temperature 10.0 1440 > th dose independent rect. 8 1
800 282.27 humidity 50.0 1440 > th dose independent rect. 8 1
802 282.27 atmosphere 995.0 1440 > th dose independent rect. 8 1
805 282.27 atmosphere 1015.0 1440 < th dose independent rect. 8 1
809 282.27 temperature 10.0 1440 > th dose independent rect. 9 23
817 282.28 wind 5.0 10 < th dose independent rect. 15 13
818 282.28 radiation 40.0 90 < th dose independent rect. 19 13
849 282.34 atmosphere 1000.0 720 > th dose independent rect. 17 2
854 282.34 wind 9.0 720 > th dose dependent rect. 17 22
855 282.35 wind 9.0 90 < th dose independent rect. 19 13
864 282.36 wind 9.0 720 > th dose dependent rect. 17 19
907 282.46 atmosphere 1000.0 90 < th dose dependent rect. 20 3
924 282.48 radiation 1.0 30 > th dose dependent rect. 16 1
941 282.51 humidity 80.0 30 < th dose independent rect. 14 3
967 282.56 atmosphere 1015.0 30 < th dose dependent rect. 16 1
969 282.56 wind 9.0 720 > th dose dependent rect. 9 9