Os10g0346300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Multicopper oxidase, type 1 domain containing protein.
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Os10g0346300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Multicopper oxidase, type 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.14 | 0.439 | 3.12 | 0.182 | 0.082 | 0.681 | 0.163 | 1.52 | 0.117 | 8.03 | 0.91 | 4320 | -- | -- |
| 90.2 | 0.442 | 3.08 | 0.531 | 0.132 | 0.579 | 0.23 | -- | 0.185 | 8.54 | 0.8775 | 4339 | -- | -- |
| 87.22 | 0.435 | 3.12 | 0.187 | 0.0823 | 0.682 | -- | 1.52 | 0.116 | 8.19 | 0.91 | 4320 | -- | -- |
| 89.89 | 0.442 | 3.1 | 0.485 | 0.139 | 0.588 | -- | -- | 0.143 | 8.19 | 1.23 | 5785 | -- | -- |
| 87.51 | 0.436 | 3.12 | 0.198 | -- | 0.683 | -- | 1.5 | 0.123 | -- | 0.88 | 4301 | -- | -- |
| 95.57 | 0.458 | 3.11 | 0.368 | 0.0805 | -- | 0.141 | -- | 0.0672 | 9.03 | -- | -- | -- | -- |
| 95.64 | 0.458 | 3.11 | 0.373 | 0.0798 | -- | -- | -- | 0.0674 | 9.21 | -- | -- | -- | -- |
| 88.78 | 0.439 | 3.1 | 0.498 | -- | 0.527 | -- | -- | 0.164 | -- | 1.058 | 14079 | -- | -- |
| 96.1 | 0.457 | 3.1 | -- | 0.137 | 0.557 | -- | -- | 0.141 | 8.17 | 1.79 | 5826 | -- | -- |
| 96.01 | 0.458 | 3.11 | 0.372 | -- | -- | -- | -- | 0.0678 | -- | -- | -- | -- | -- |
| 99.3 | 0.466 | 3.12 | -- | 0.0802 | -- | -- | -- | 0.0259 | 8.86 | -- | -- | -- | -- |
| 95.7 | 0.456 | 3.12 | -- | -- | 0.443 | -- | -- | 0.12 | -- | 2.31 | 9780 | -- | -- |
| 99.66 | 0.466 | 3.12 | -- | -- | -- | -- | -- | 0.0264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 3 | 77.80 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 4 | 77.90 | wind | 1 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 5 | 77.93 | wind | 3 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 6 | 78.09 | wind | 3 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 7 | 78.13 | wind | 1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 8 | 78.15 | wind | 5 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 12 | 78.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 14 | 78.58 | wind | 3 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 18 | 78.66 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 23 | 78.68 | wind | 3 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 26 | 78.70 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 28 | 78.72 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 30 | 78.74 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 46 | 78.82 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 51 | 78.82 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 100 | 78.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 15 |
| 101 | 78.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 19 |
| 127 | 78.91 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 181 | 78.95 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 22 | NA |
| 201 | 78.96 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 290 | 79.03 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 21 | NA |
| 304 | 79.04 | wind | 3 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 305 | 79.04 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 327 | 79.05 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 384 | 79.07 | wind | 1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 462 | 79.10 | wind | 3 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 463 | 79.10 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 535 | 79.12 | atmosphere | 995 | 43200 | > th | dose dependent | no | NA | NA |
| 562 | 79.12 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 601 | 79.14 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 21 |
| 705 | 79.17 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 733 | 79.18 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 775 | 79.19 | atmosphere | 1015 | 43200 | < th | dose dependent | no | NA | NA |
| 811 | 79.19 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 842 | 79.20 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 957 | 79.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |