Os10g0345200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0345200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.91 | 0.852 | 4.45 | 0.00819 | 0.728 | 1.58 | -0.867 | 1.16 | -1.53 | 21.2 | 20.51 | 1353 | -- | -- |
| 331.64 | 0.848 | 4.48 | -0.193 | 0.75 | 1.42 | -0.788 | -- | -1.55 | 21.3 | 20.58 | 1353 | -- | -- |
| 331.57 | 0.848 | 4.45 | 0.0329 | 0.734 | 1.57 | -- | 1.13 | -1.53 | 21.2 | 20.52 | 1354 | -- | -- |
| 333.96 | 0.851 | 4.48 | -0.168 | 0.735 | 1.41 | -- | -- | -1.57 | 21.2 | 20.6 | 1345 | -- | -- |
| 357.07 | 0.88 | 4.42 | 0.0565 | -- | 1.52 | -- | 0.995 | -1.49 | -- | 20.6 | 1009 | -- | -- |
| 377.26 | 0.911 | 4.41 | 0.389 | 0.755 | -- | -0.732 | -- | -1.25 | 21.6 | -- | -- | -- | -- |
| 379.25 | 0.912 | 4.41 | 0.416 | 0.759 | -- | -- | -- | -1.25 | 21.5 | -- | -- | -- | -- |
| 357.06 | 0.88 | 4.46 | -0.114 | -- | 1.39 | -- | -- | -1.56 | -- | 20.59 | 873 | -- | -- |
| 334.57 | 0.852 | 4.47 | -- | 0.737 | 1.34 | -- | -- | -1.53 | 21.2 | 20.51 | 1311 | -- | -- |
| 413.23 | 0.95 | 4.39 | 0.422 | -- | -- | -- | -- | -1.25 | -- | -- | -- | -- | -- |
| 383.83 | 0.916 | 4.42 | -- | 0.76 | -- | -- | -- | -1.29 | 21.6 | -- | -- | -- | -- |
| 357.36 | 0.88 | 4.46 | -- | -- | 1.36 | -- | -- | -1.54 | -- | 20.59 | 873 | -- | -- |
| 417.93 | 0.954 | 4.4 | -- | -- | -- | -- | -- | -1.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 317.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 2 | 318.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 5 | 318.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 5 |
| 8 | 318.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 5 |
| 30 | 320.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 111 | 325.30 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 116 | 325.51 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 327 | 329.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 374 | 330.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 446 | 331.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 489 | 331.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 521 | 332.05 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 544 | 332.42 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 626 | 333.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 635 | 333.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 794 | 336.21 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 832 | 336.81 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 974 | 338.43 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 989 | 338.52 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 3 |