Os10g0344000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0344000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.28 | 0.532 | 8.86 | 2.34 | 1.23 | -0.73 | 1.07 | 1.41 | -0.117 | 8.48 | 89.63 | 15 | -- | -- |
| 132.84 | 0.541 | 8.87 | 2.39 | 1.23 | -0.686 | 0.961 | -- | -0.102 | 8.28 | 89.33 | 13 | -- | -- |
| 131.83 | 0.535 | 8.86 | 2.37 | 1.23 | -0.683 | -- | 1.26 | -0.109 | 8.57 | 89.49 | 21 | -- | -- |
| 135.46 | 0.546 | 8.87 | 2.41 | 1.22 | -0.616 | -- | -- | -0.0907 | 8.5 | 89 | 13 | -- | -- |
| 214.6 | 0.686 | 8.89 | 2.37 | -- | -0.605 | -- | 1.27 | -0.0783 | -- | 89.49 | 21 | -- | -- |
| 144.07 | 0.563 | 8.84 | 2.31 | 1.2 | -- | 0.605 | -- | 0.024 | 9.44 | -- | -- | -- | -- |
| 145.38 | 0.565 | 8.84 | 2.33 | 1.2 | -- | -- | -- | 0.0254 | 9.51 | -- | -- | -- | -- |
| 212.67 | 0.682 | 8.89 | 2.36 | -- | -0.524 | -- | -- | -0.0265 | -- | 75 | 3 | -- | -- |
| 282.69 | 0.783 | 8.91 | -- | 1.2 | -0.456 | -- | -- | -0.274 | 8.21 | 72.4 | 19 | -- | -- |
| 230.02 | 0.709 | 8.88 | 2.32 | -- | -- | -- | -- | 0.0287 | -- | -- | -- | -- | -- |
| 288.45 | 0.794 | 8.9 | -- | 1.2 | -- | -- | -- | -0.234 | 9.37 | -- | -- | -- | -- |
| 357.74 | 0.884 | 8.94 | -- | -- | -0.483 | -- | -- | -0.268 | -- | 69 | 14 | -- | -- |
| 372.19 | 0.9 | 8.93 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 115.83 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 117.40 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 117.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 7 | 119.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 8 | 119.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 9 | 119.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 10 | 119.90 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 21 | 120.94 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 51 | 121.85 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 60 | 122.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 79 | 123.42 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 83 | 123.53 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 87 | 124.54 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 89 | 124.61 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 91 | 124.61 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 93 | 124.61 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 144 | 124.61 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 146 | 124.61 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 148 | 124.61 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 211 | 125.37 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 240 | 126.80 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 241 | 126.94 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 270 | 127.72 | humidity | 90.0 | 10 | > th | dose independent | sin | 7 | NA |
| 271 | 127.76 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 275 | 127.78 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 279 | 127.89 | humidity | 90.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 285 | 127.96 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 309 | 128.16 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 312 | 128.20 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 320 | 128.27 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 322 | 128.29 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 323 | 128.29 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 324 | 128.29 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 327 | 128.30 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 9 |
| 334 | 128.31 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 342 | 128.35 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 355 | 128.39 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 366 | 128.40 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 378 | 128.41 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 384 | 128.44 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 390 | 128.46 | humidity | 90.0 | 10 | > th | dose dependent | no | NA | NA |
| 401 | 128.46 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 402 | 128.46 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 407 | 128.46 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 411 | 128.48 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 420 | 128.50 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 431 | 128.54 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 7 |
| 455 | 128.61 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 21 |
| 488 | 128.71 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 568 | 128.84 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 642 | 128.98 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 643 | 128.98 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 644 | 128.98 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 651 | 129.01 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 654 | 129.02 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 658 | 129.03 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 659 | 129.04 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 669 | 129.05 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 677 | 129.08 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 683 | 129.11 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 17 |
| 686 | 129.11 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 691 | 129.12 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 18 |
| 695 | 129.13 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 696 | 129.13 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 19 |
| 750 | 129.22 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 21 |
| 759 | 129.24 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 18 |
| 766 | 129.25 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 7 | 20 |
| 775 | 129.26 | humidity | 90.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 784 | 129.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 801 | 129.29 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 10 |
| 806 | 129.30 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 845 | 129.33 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 15 | 13 |
| 860 | 129.35 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 885 | 129.39 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 905 | 129.41 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 913 | 129.41 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 7 | 19 |
| 924 | 129.42 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 22 |
| 925 | 129.43 | temperature | 20.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 956 | 129.47 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 978 | 129.50 | humidity | 90.0 | 10 | > th | dose independent | rect. | 20 | 12 |
| 980 | 129.50 | humidity | 90.0 | 10 | > th | dose independent | rect. | 20 | 14 |
| 992 | 129.51 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 2 | 16 |