Os10g0343400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cellulose synthase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0343400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cellulose synthase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.61 | 0.435 | 3.21 | -0.0165 | 0.11 | -0.493 | 0.116 | 1.98 | 0.0186 | 8.09 | 1.024 | 16 | -- | -- |
| 88.98 | 0.439 | 3.19 | 0.0649 | 0.131 | -0.345 | 0.0923 | -- | 0.0406 | 7.92 | 1.027 | 16 | -- | -- |
| 85.64 | 0.431 | 3.21 | -0.0125 | 0.113 | -0.485 | -- | 1.97 | 0.0182 | 7.6 | 1.036 | 16 | -- | -- |
| 88.97 | 0.439 | 3.19 | 0.0676 | 0.134 | -0.335 | -- | -- | 0.0399 | 7.24 | 1.054 | 16 | -- | -- |
| 86.28 | 0.433 | 3.21 | -0.0186 | -- | -0.528 | -- | 2.03 | 0.0193 | -- | 1.057 | 16 | -- | -- |
| 91.33 | 0.448 | 3.19 | 0.109 | 0.21 | -- | -0.205 | -- | 0.0352 | 5.72 | -- | -- | -- | -- |
| 91.41 | 0.448 | 3.19 | 0.108 | 0.21 | -- | -- | -- | 0.0363 | 6.08 | -- | -- | -- | -- |
| 89.86 | 0.441 | 3.19 | 0.0631 | -- | -0.386 | -- | -- | 0.0423 | -- | 1.045 | 16 | -- | -- |
| 89.09 | 0.44 | 3.19 | -- | 0.133 | -0.345 | -- | -- | 0.0326 | 7.26 | 1.053 | 16 | -- | -- |
| 93.7 | 0.452 | 3.19 | 0.114 | -- | -- | -- | -- | 0.041 | -- | -- | -- | -- | -- |
| 91.71 | 0.448 | 3.19 | -- | 0.212 | -- | -- | -- | 0.0242 | 6.05 | -- | -- | -- | -- |
| 89.96 | 0.442 | 3.19 | -- | -- | -0.395 | -- | -- | 0.0355 | -- | 1.045 | 16 | -- | -- |
| 94.04 | 0.453 | 3.2 | -- | -- | -- | -- | -- | 0.0283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.73 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 3 | 70.99 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 5 | 71.06 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 71.08 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 10 | 71.10 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 16 | 71.12 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 17 | 71.12 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 18 | 71.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 22 | 71.12 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 24 | 71.13 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 71.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 27 | 71.13 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 71.13 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 31 | 71.13 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 71.13 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 38 | 71.13 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 39 | 71.13 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 40 | 71.13 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 71.13 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 47 | 71.19 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 51 | 71.21 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 56 | 71.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 57 | 71.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 108 | 71.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 109 | 71.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 111 | 71.83 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 112 | 71.87 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 137 | 72.65 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 138 | 72.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 141 | 72.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 145 | 72.65 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 154 | 72.65 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 155 | 72.65 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 175 | 72.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 191 | 75.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 251 | 79.41 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 254 | 79.48 | wind | 1.0 | 30 | < th | dose independent | rect. | 21 | 6 |
| 266 | 79.72 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 267 | 79.79 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 273 | 80.19 | wind | 1.0 | 30 | < th | dose independent | rect. | 14 | 13 |
| 279 | 80.41 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 283 | 80.48 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 294 | 81.11 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 295 | 81.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 297 | 81.22 | wind | 3.0 | 30 | < th | dose dependent | rect. | 22 | 5 |
| 298 | 81.28 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 330 | 81.77 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 338 | 81.94 | wind | 3.0 | 30 | < th | dose dependent | rect. | 20 | 7 |
| 359 | 82.35 | wind | 3.0 | 30 | < th | dose dependent | rect. | 16 | 11 |
| 389 | 82.51 | wind | 3.0 | 30 | < th | dose dependent | rect. | 13 | 14 |
| 395 | 82.56 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 433 | 83.08 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 3 |
| 435 | 83.08 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 438 | 83.16 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 504 | 83.93 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 513 | 84.01 | humidity | 90.0 | 10 | > th | dose independent | rect. | 22 | 5 |
| 551 | 84.29 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 576 | 84.49 | wind | 1.0 | 10 | > th | dose independent | sin | 16 | NA |
| 602 | 84.59 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 637 | 84.73 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 643 | 84.79 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 650 | 84.85 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 681 | 85.08 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 684 | 85.09 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 687 | 85.11 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 689 | 85.12 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 747 | 85.31 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 748 | 85.31 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 751 | 85.32 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 752 | 85.32 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 753 | 85.32 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 776 | 85.41 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 796 | 85.50 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 799 | 85.52 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 12 |
| 836 | 85.58 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 10 |
| 844 | 85.62 | humidity | 50.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 879 | 85.79 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 908 | 85.88 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 914 | 85.89 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 915 | 85.89 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 923 | 85.93 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 946 | 86.01 | radiation | 40.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 948 | 86.02 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 972 | 86.11 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 16 |