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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0343000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.52 (0.0292) R2 : 0.846
β1 : -2.06 (0.107) R2dD : 0.13 R2D : 0.0972
β2 : 3.5 (0.0757) R2dC : 0.725 R2C : 0.699
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.608 (0.0623) R2dN8 : 0.0431 R2N8 : -0.00212
σ : 0.549
deviance : 137.36
__
_____
C
peak time of C : 7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
126.19 0.528 7.52 -2.07 3.61 -0.454 0.00693 1.59 -0.707 6.83 88.08 9 -- --
133.28 0.538 7.53 -2.01 3.62 -0.365 0.187 -- -0.684 6.81 86.01 10 -- --
126.19 0.523 7.52 -2.07 3.61 -0.453 -- 1.59 -0.708 6.83 88.03 8 -- --
133.37 0.538 7.54 -2.01 3.62 -0.361 -- -- -0.684 6.81 85.93 10 -- --
714.69 1.25 7.54 -2.16 -- 1.35 -- 2.98 -0.402 -- 93.05 15 -- --
137.35 0.549 7.52 -2.06 3.5 -- 0.0619 -- -0.608 7 -- -- -- --
137.36 0.549 7.52 -2.06 3.5 -- -- -- -0.608 7 -- -- -- --
446.37 0.984 7.57 -2.31 -- 3.28 -- -- -0.118 -- 65.31 511 -- --
238.02 0.722 7.5 -- 3.67 -0.626 -- -- -0.51 6.73 88.14 10 -- --
781.32 1.31 7.6 -1.99 -- -- -- -- -0.544 -- -- -- -- --
248.93 0.738 7.47 -- 3.48 -- -- -- -0.379 7.04 -- -- -- --
543.42 1.09 7.52 -- -- 3.36 -- -- -0.193 -- 61.23 528 -- --
885.43 1.39 7.55 -- -- -- -- -- -0.324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 117.68 precipitation 0.1 270 > th dose independent rect. 2 2
2 117.69 precipitation 0.1 270 > th dose dependent rect. 2 2
3 118.00 wind 1.0 1440 > th dose independent rect. 23 1
4 119.13 radiation 1.0 1440 > th dose independent rect. 12 1
6 119.83 radiation 1.0 1440 < th dose independent rect. 11 1
7 119.83 radiation 1.0 1440 < th dose dependent rect. 11 1
11 120.58 wind 1.0 1440 < th dose independent rect. 23 1
17 120.74 radiation 1.0 1440 < th dose independent rect. 9 5
18 120.74 radiation 1.0 1440 < th dose dependent rect. 9 5
40 121.35 temperature 20.0 720 > th dose independent rect. 22 4
71 122.58 wind 1.0 1440 > th dose independent rect. 23 13
75 122.71 wind 1.0 1440 > th dose independent rect. 23 10
78 122.75 temperature 20.0 270 > th dose independent rect. 22 10
80 122.79 radiation 20.0 1440 < th dose independent rect. 11 2
90 122.90 radiation 20.0 1440 < th dose dependent rect. 11 2
107 123.16 wind 1.0 1440 > th dose independent rect. 23 8
138 123.61 wind 1.0 1440 > th dose independent sin 9 NA
142 123.66 humidity 90.0 10 < th dose independent rect. 18 21
145 123.70 humidity 60.0 720 > th dose dependent rect. 21 5
149 123.71 temperature 10.0 270 > th dose dependent rect. 22 11
152 123.73 wind 1.0 1440 < th dose independent rect. 23 10
153 123.73 wind 1.0 1440 < th dose independent rect. 23 13
164 123.89 humidity 90.0 720 > th dose dependent rect. 20 4
175 123.96 wind 1.0 720 > th dose independent rect. 17 22
192 124.05 wind 1.0 1440 < th dose independent rect. 19 17
195 124.08 wind 1.0 1440 < th dose independent rect. 19 14
197 124.08 wind 1.0 90 < th dose independent rect. 7 21
205 124.11 wind 1.0 1440 < th dose dependent rect. 23 1
216 124.22 temperature 10.0 720 > th dose dependent rect. 6 3
233 124.32 wind 1.0 270 < th dose independent rect. 7 19
237 124.34 atmosphere 1005.0 10 < th dose dependent rect. 1 6
247 124.44 wind 1.0 1440 > th dose independent rect. 19 7
250 124.46 humidity 80.0 1440 > th dose dependent rect. 12 1
252 124.47 wind 1.0 720 > th dose independent rect. 23 23
279 124.60 humidity 80.0 720 > th dose dependent rect. 12 13
282 124.63 wind 1.0 1440 < th dose independent sin 9 NA
299 124.68 temperature 20.0 4320 < th dose independent rect. 14 5
312 124.73 humidity 90.0 10 < th dose independent rect. 20 19
316 124.75 wind 1.0 270 < th dose dependent rect. 24 1
328 124.79 wind 1.0 1440 > th dose independent rect. 19 9
339 124.86 wind 1.0 270 < th dose independent rect. 11 15
357 124.95 humidity 60.0 14400 > th dose independent rect. 21 11
367 124.99 wind 3.0 30 < th dose dependent rect. 23 15
378 125.04 humidity 90.0 10 > th dose independent rect. 22 9
390 125.08 temperature 15.0 90 > th dose dependent rect. 24 10
391 125.09 humidity 90.0 10 > th dose independent sin 8 NA
392 125.09 temperature 10.0 43200 > th dose independent rect. 8 3
399 125.10 temperature 20.0 720 < th dose independent rect. 23 6
419 125.16 temperature 20.0 720 < th dose independent rect. 23 4
421 125.16 humidity 80.0 720 > th dose independent rect. 12 15
438 125.21 temperature 20.0 4320 < th dose dependent rect. 17 2
448 125.27 radiation 1.0 1440 > th dose dependent rect. 11 2
465 125.31 wind 1.0 720 < th dose independent rect. 21 4
483 125.35 precipitation 0.1 270 > th dose independent rect. 17 12
491 125.37 wind 1.0 14400 < th dose independent rect. 23 3
495 125.38 precipitation 0.1 270 > th dose independent rect. 17 14
504 125.39 precipitation 0.1 270 < th dose independent rect. 9 13
509 125.39 precipitation 0.1 270 < th dose dependent rect. 9 13
511 125.40 wind 1.0 720 < th dose independent rect. 16 9
513 125.40 precipitation 0.1 720 < th dose independent rect. 3 18
516 125.40 precipitation 0.1 720 < th dose dependent rect. 3 18
517 125.41 temperature 20.0 4320 > th dose independent rect. 14 4
530 125.44 precipitation 0.1 10 > th dose independent rect. 3 15
545 125.47 atmosphere 1005.0 270 < th dose dependent rect. 1 1
556 125.50 precipitation 0.1 720 < th dose independent rect. 9 21
559 125.50 precipitation 0.1 720 < th dose dependent rect. 9 21
560 125.51 precipitation 0.1 270 > th dose independent sin 11 NA
575 125.54 wind 1.0 720 < th dose independent rect. 19 6
577 125.54 precipitation 0.1 10 > th dose dependent rect. 3 15
601 125.59 humidity 90.0 10 < th dose independent rect. 10 21
630 125.66 precipitation 0.1 270 > th dose independent rect. 17 16
632 125.67 wind 1.0 14400 > th dose independent rect. 23 3
663 125.73 humidity 80.0 1440 > th dose independent rect. 12 1
677 125.75 wind 1.0 1440 > th dose independent rect. 14 19
690 125.77 precipitation 0.1 720 < th dose independent rect. 10 11
695 125.77 precipitation 0.1 720 < th dose dependent rect. 10 11
709 125.78 radiation 10.0 1440 < th dose dependent rect. 9 20
762 125.84 wind 1.0 1440 > th dose independent rect. 14 22
814 125.92 wind 1.0 1440 < th dose independent rect. 19 9
818 125.92 humidity 90.0 10 > th dose dependent sin 8 NA
823 125.94 wind 1.0 1440 < th dose independent rect. 23 5
824 125.94 humidity 60.0 14400 > th dose independent rect. 24 8
834 125.97 wind 1.0 14400 > th dose independent rect. 1 1
846 125.99 temperature 10.0 43200 > th dose independent rect. 8 11
866 126.02 humidity 90.0 10 > th dose independent rect. 22 16
914 126.10 humidity 90.0 10 < th dose independent sin 7 NA
924 126.11 humidity 90.0 30 > th dose dependent rect. 22 9
964 126.19 precipitation 0.1 720 < th dose independent rect. 10 19
968 126.19 precipitation 0.1 720 < th dose dependent rect. 10 19
972 126.21 humidity 80.0 720 > th dose dependent sin 17 NA
978 126.22 humidity 50.0 270 > th dose dependent rect. 21 12
993 126.24 humidity 90.0 10 > th dose dependent rect. 22 20