Os10g0341700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cellulose synthase-like H1.
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Os10g0341700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cellulose synthase-like H1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.27 | 0.436 | 10.6 | -0.453 | 0.358 | -0.545 | 1.18 | 1.05 | 0.899 | 18.4 | 83.77 | 15 | -- | -- |
| 87.76 | 0.44 | 10.6 | -0.464 | 0.38 | -0.642 | 1.36 | -- | 0.898 | 17.6 | 84.98 | 15 | -- | -- |
| 89.65 | 0.441 | 10.6 | -0.463 | 0.361 | -0.541 | -- | 1.19 | 0.904 | 18.1 | 83.99 | 16 | -- | -- |
| 92.15 | 0.447 | 10.6 | -0.469 | 0.379 | -0.561 | -- | -- | 0.907 | 18 | 85 | 5 | -- | -- |
| 95.54 | 0.458 | 10.5 | -0.483 | -- | -0.436 | -- | 1.31 | 0.901 | -- | 82 | 10 | -- | -- |
| 94.88 | 0.457 | 10.6 | -0.471 | 0.309 | -- | 0.856 | -- | 0.924 | 19.7 | -- | -- | -- | -- |
| 96.22 | 0.459 | 10.6 | -0.497 | 0.32 | -- | -- | -- | 0.922 | 21 | -- | -- | -- | -- |
| 98.33 | 0.464 | 10.5 | -0.487 | -- | -0.393 | -- | -- | 0.904 | -- | 83.38 | 5 | -- | -- |
| 98.02 | 0.461 | 10.5 | -- | 0.39 | -0.594 | -- | -- | 0.959 | 17.8 | 85 | 5 | -- | -- |
| 102.1 | 0.472 | 10.5 | -0.496 | -- | -- | -- | -- | 0.92 | -- | -- | -- | -- | -- |
| 102.72 | 0.474 | 10.5 | -- | 0.321 | -- | -- | -- | 0.978 | 20.9 | -- | -- | -- | -- |
| 104.55 | 0.478 | 10.5 | -- | -- | -0.413 | -- | -- | 0.956 | -- | 82.28 | 5 | -- | -- |
| 108.59 | 0.486 | 10.5 | -- | -- | -- | -- | -- | 0.975 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.57 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 9 | 82.89 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 15 | 83.24 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 11 |
| 32 | 83.67 | humidity | 80.0 | 10 | < th | dose independent | sin | 23 | NA |
| 37 | 83.77 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 9 |
| 50 | 84.03 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 7 | 9 |
| 51 | 84.05 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 20 |
| 57 | 84.11 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 62 | 84.17 | humidity | 80.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 65 | 84.19 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 9 |
| 103 | 84.35 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 107 | 84.37 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 9 | 7 |
| 120 | 84.39 | humidity | 80.0 | 10 | < th | dose independent | rect. | 11 | 7 |
| 152 | 84.47 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 11 | 5 |
| 257 | 84.76 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 11 | 7 |
| 353 | 84.92 | humidity | 80.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 463 | 85.09 | humidity | 90.0 | 30 | < th | dose dependent | sin | 23 | NA |
| 467 | 85.10 | humidity | 80.0 | 270 | < th | dose independent | sin | 3 | NA |
| 472 | 85.10 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 538 | 85.29 | humidity | 80.0 | 10 | > th | dose independent | sin | 0 | NA |
| 561 | 85.35 | humidity | 90.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 680 | 85.69 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 700 | 85.76 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 16 |
| 713 | 85.79 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 717 | 85.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 734 | 85.82 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 743 | 85.84 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 6 | 19 |
| 746 | 85.85 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 759 | 85.87 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 774 | 85.89 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 792 | 85.92 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 6 |
| 811 | 85.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 814 | 85.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 837 | 86.00 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 4 |
| 850 | 86.03 | radiation | 1.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 852 | 86.04 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 895 | 86.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 896 | 86.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 916 | 86.15 | humidity | 70.0 | 270 | < th | dose independent | rect. | 11 | 2 |
| 951 | 86.18 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 980 | 86.23 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 984 | 86.24 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 1000 | 86.26 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 12 | 8 |