Os10g0339400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os10g0339400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.58 | 0.191 | 12.6 | 0.432 | 0.0861 | 0.393 | -0.0132 | 0.439 | 0.421 | 23 | 1010 | 6175 | -- | -- |
| 16.71 | 0.19 | 12.6 | 0.529 | 0.0957 | 0.305 | 0.0656 | -- | 0.457 | 22.7 | 1009 | 11991 | -- | -- |
| 16.58 | 0.19 | 12.6 | 0.432 | 0.0863 | 0.393 | -- | 0.439 | 0.421 | 23 | 1010 | 6174 | -- | -- |
| 16.68 | 0.19 | 12.6 | 0.529 | 0.0908 | 0.314 | -- | -- | 0.457 | 22.7 | 1009 | 12018 | -- | -- |
| 17.04 | 0.192 | 12.6 | 0.437 | -- | 0.392 | -- | 0.425 | 0.422 | -- | 1010 | 6116 | -- | -- |
| 20.42 | 0.212 | 12.6 | 0.395 | 0.0858 | -- | -0.0156 | -- | 0.363 | 22.7 | -- | -- | -- | -- |
| 20.42 | 0.212 | 12.6 | 0.396 | 0.0859 | -- | -- | -- | 0.363 | 22.6 | -- | -- | -- | -- |
| 17.13 | 0.193 | 12.6 | 0.519 | -- | 0.308 | -- | -- | 0.461 | -- | 1009 | 11990 | -- | -- |
| 22.87 | 0.223 | 12.6 | -- | 0.0928 | 0.24 | -- | -- | 0.351 | 23.1 | 1006 | 11240 | -- | -- |
| 20.87 | 0.213 | 12.6 | 0.398 | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
| 24.55 | 0.232 | 12.6 | -- | 0.089 | -- | -- | -- | 0.319 | 22.9 | -- | -- | -- | -- |
| 23.34 | 0.225 | 12.6 | -- | -- | 0.232 | -- | -- | 0.345 | -- | 1005 | 11512 | -- | -- |
| 25.04 | 0.234 | 12.6 | -- | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 16.35 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 3 | 16.39 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 5 | 16.53 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 6 | 16.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 7 | 16.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 8 | 16.55 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 9 | 16.55 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 10 | 16.59 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 12 | 16.60 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 13 | 16.60 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 22 | 16.66 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 24 | 16.68 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 33 | 16.68 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 55 | 16.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 56 | 16.73 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 68 | 16.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 75 | 16.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 80 | 16.83 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 84 | 16.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 85 | 16.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 87 | 16.85 | atmosphere | 1005.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 94 | 16.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 112 | 16.89 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 115 | 16.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 116 | 16.89 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 123 | 16.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 124 | 16.90 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 126 | 16.90 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 131 | 16.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 138 | 16.91 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 145 | 16.92 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 171 | 16.92 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 174 | 16.92 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 181 | 16.93 | radiation | 30.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 182 | 16.93 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 184 | 16.93 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 225 | 16.94 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 228 | 16.94 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 229 | 16.94 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 246 | 16.94 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 19 | NA |
| 248 | 16.94 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 264 | 16.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 270 | 16.95 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 283 | 16.95 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 290 | 16.95 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 296 | 16.95 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 317 | 16.95 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 11 |
| 326 | 16.95 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 327 | 16.95 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 342 | 16.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 378 | 16.96 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 389 | 16.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 407 | 16.96 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 6 | 12 |
| 463 | 16.97 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 489 | 16.97 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 490 | 16.97 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 518 | 16.97 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 576 | 16.97 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 582 | 16.97 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 21 |
| 594 | 16.98 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 616 | 16.98 | atmosphere | 1010.0 | 14400 | > th | dose dependent | no | NA | NA |
| 617 | 16.98 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 741 | 16.98 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 764 | 16.99 | radiation | 10.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 945 | 17.00 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 11 | NA |