Os10g0337700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MFP1 attachment factor 1.
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Os10g0337700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MFP1 attachment factor 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.05 | 0.517 | 7.13 | 0.522 | 3.66 | 3.48 | -0.415 | 1.18 | 0.2 | 22.5 | 10.92 | 457 | 22.7 | -- |
| 121.43 | 0.513 | 7.16 | 0.422 | 4.48 | 4.16 | -0.984 | -- | 0.174 | 22.4 | 6.571 | 453 | 23 | -- |
| 120.75 | 0.512 | 7.15 | 0.557 | 4.23 | 3.98 | -- | 1.67 | 0.199 | 22.4 | 8.439 | 423 | 22.7 | -- |
| 125.32 | 0.521 | 7.18 | 0.429 | 4.77 | 4.39 | -- | -- | 0.166 | 22.2 | 6.36 | 420 | 23 | -- |
| 177.74 | 0.621 | 7.01 | 0.622 | -- | 2.23 | -- | -1.15 | 0.388 | -- | -25.49 | 991 | 17.9 | -- |
| 193.74 | 0.653 | 7.02 | 0.883 | 1.72 | -- | -1.1 | -- | 0.515 | 20.6 | -- | -- | -- | -- |
| 197.54 | 0.658 | 7.02 | 0.921 | 1.73 | -- | -- | -- | 0.516 | 20.5 | -- | -- | -- | -- |
| 174.58 | 0.615 | 7.02 | 0.612 | -- | 2.51 | -- | -- | 0.472 | -- | -88.58 | 1308 | 20.7 | -- |
| 130 | 0.531 | 7.18 | -- | 4.86 | 4.66 | -- | -- | 0.119 | 22.4 | 6.705 | 420 | 22.8 | -- |
| 365.47 | 0.893 | 6.98 | 0.913 | -- | -- | -- | -- | 0.5 | -- | -- | -- | -- | -- |
| 219.88 | 0.694 | 7.05 | -- | 1.73 | -- | -- | -- | 0.414 | 20.6 | -- | -- | -- | -- |
| 175.36 | 0.617 | 7.06 | -- | -- | 2.89 | -- | -- | 0.162 | -- | -217.3 | 1394 | 21.4 | -- |
| 387.47 | 0.919 | 7 | -- | -- | -- | -- | -- | 0.399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 6 | 125.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 12 | 125.87 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 23 | 126.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 27 | 127.27 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 38 | 127.62 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 217 | 132.77 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 244 | 133.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 294 | 134.23 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 335 | 135.13 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 375 | 135.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 405 | 136.44 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 434 | 136.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 457 | 137.25 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 540 | 138.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 600 | 139.11 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 20 |
| 605 | 139.14 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 624 | 139.29 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 668 | 139.88 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 6 |
| 671 | 139.90 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 8 |
| 791 | 140.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 800 | 141.00 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 884 | 141.70 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 893 | 141.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 899 | 141.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |