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Os10g0336600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.55 (0.0238) R2 : 0.792
β1 : 1.19 (0.0872) R2dD : 0.0886 R2D : 0.0744
β2 : 1.2 (0.0606) R2dC : 0.209 R2C : -0.0789
β3 : -2.67 (0.0691) R2dE : 0.789 R2E : 0.478
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.13 (0.0508) R2dN8 : 0.00427 R2N8 : 0.0137
σ : 0.445
deviance : 91.12
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C
peak time of C : 0.751
E
wheather : temperature
threshold : 5.016
memory length : 242
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.5
open length of G : 14

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.54 0.424 8.53 1.34 1.09 -2.58 1.21 1.08 -0.0982 1.41 8.47 252 11.3 14.1
81.93 0.422 8.54 1.25 1.27 -2.79 1.44 -- -0.109 0.407 4.467 245 11.5 14
85.77 0.431 8.53 1.33 1.26 -2.67 -- 1.78 -0.0866 1 6.401 236 11.7 14
91.12 0.445 8.55 1.19 1.2 -2.67 -- -- -0.13 0.751 5.016 242 11.5 14
118.65 0.507 8.48 1.64 -- -2.78 -- 2.34 -0.0258 -- 15.21 172 10.8 14.6
129.91 0.534 8.52 0.963 2.28 -- 0.377 -- -0.297 5.98 -- -- -- --
130.25 0.534 8.52 0.967 2.28 -- -- -- -0.298 6.01 -- -- -- --
116.24 0.502 8.52 1.33 -- -2.81 -- -- -0.0473 -- 14.91 189 10.6 14.6
125.81 0.522 8.58 -- 1.36 -2.32 -- -- -0.273 1.45 -1.84 232 11.8 13.9
399.51 0.934 8.56 1.03 -- -- -- -- -0.246 -- -- -- -- --
154.89 0.582 8.54 -- 2.29 -- -- -- -0.406 5.98 -- -- -- --
161.76 0.592 8.56 -- -- -2.52 -- -- -0.25 -- 11.84 191 10.6 14.6
427.68 0.965 8.58 -- -- -- -- -- -0.361 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.50 temperature 10.0 270 > th dose dependent rect. 11 14
29 91.59 temperature 30.0 270 < th dose dependent rect. 15 6
32 92.42 temperature 30.0 270 < th dose independent rect. 16 5
42 93.40 temperature 10.0 90 > th dose dependent sin 18 NA
58 94.39 temperature 10.0 270 > th dose dependent sin 20 NA
93 95.97 radiation 10.0 270 < th dose dependent rect. 15 6
99 96.13 humidity 70.0 270 > th dose independent rect. 15 6
101 96.13 humidity 50.0 270 > th dose dependent rect. 16 5
117 96.59 temperature 30.0 270 < th dose independent rect. 7 14
126 96.78 temperature 30.0 90 < th dose dependent rect. 11 12
136 97.06 radiation 10.0 270 < th dose dependent rect. 8 13
138 97.15 radiation 10.0 270 < th dose dependent rect. 10 11
142 97.27 temperature 10.0 720 > th dose dependent rect. 12 5
152 97.55 temperature 10.0 270 > th dose dependent rect. 20 22
156 97.70 radiation 1.0 90 > th dose independent sin 19 NA
158 97.73 atmosphere 1005.0 270 > th dose independent rect. 16 5
173 97.98 radiation 1.0 270 < th dose independent rect. 15 6
175 98.01 radiation 1.0 270 < th dose independent rect. 8 13
185 98.22 humidity 70.0 270 > th dose independent rect. 17 3
207 98.46 temperature 30.0 270 < th dose dependent rect. 11 10
220 98.64 radiation 1.0 270 > th dose independent sin 22 NA
225 98.68 temperature 10.0 720 > th dose dependent rect. 6 11
228 98.73 temperature 30.0 270 < th dose independent rect. 16 17
263 99.23 temperature 10.0 270 > th dose dependent rect. 21 20
270 99.36 temperature 20.0 90 > th dose independent rect. 12 16
274 99.40 radiation 1.0 90 < th dose independent sin 18 NA
282 99.49 radiation 1.0 90 < th dose dependent sin 19 NA
296 99.64 temperature 30.0 270 < th dose independent rect. 16 14
324 99.86 temperature 15.0 270 > th dose dependent rect. 9 8
337 99.99 temperature 30.0 270 < th dose independent rect. 4 17
361 100.17 temperature 30.0 90 < th dose dependent sin 19 NA
368 100.24 temperature 30.0 270 < th dose independent rect. 15 19
381 100.31 radiation 1.0 270 < th dose independent sin 22 NA
395 100.42 temperature 10.0 90 > th dose dependent rect. 23 20
406 100.51 temperature 30.0 10 < th dose dependent sin 18 NA
414 100.61 radiation 1.0 270 < th dose dependent sin 23 NA
437 100.79 precipitation 0.1 270 < th dose independent rect. 12 14
440 100.79 precipitation 0.1 270 < th dose dependent rect. 12 14
447 100.85 temperature 30.0 270 < th dose dependent rect. 3 18
454 100.91 atmosphere 1005.0 270 > th dose dependent rect. 16 4
518 101.43 atmosphere 995.0 270 > th dose dependent rect. 17 4
524 101.49 humidity 50.0 270 > th dose independent rect. 7 14
581 101.79 temperature 30.0 10 < th dose dependent rect. 17 6
584 101.81 precipitation 0.1 270 < th dose independent rect. 2 10
587 101.81 precipitation 0.1 270 < th dose dependent rect. 2 10
603 101.93 temperature 30.0 270 < th dose independent rect. 1 22
635 102.13 atmosphere 1005.0 270 > th dose independent rect. 17 1
662 102.29 atmosphere 1015.0 30 < th dose dependent rect. 12 16
681 102.46 humidity 50.0 270 > th dose independent rect. 2 10
739 102.74 temperature 10.0 720 > th dose dependent rect. 6 18
744 102.76 atmosphere 1015.0 90 < th dose dependent rect. 13 14
762 102.82 temperature 10.0 270 > th dose independent rect. 2 10
763 102.82 atmosphere 995.0 270 > th dose independent rect. 2 10
764 102.82 atmosphere 1015.0 270 < th dose independent rect. 2 10
765 102.82 temperature 10.0 270 > th dose independent rect. 12 14
781 102.88 humidity 60.0 270 > th dose independent rect. 16 17
876 103.39 humidity 60.0 270 > th dose independent rect. 16 13
882 103.43 wind 9.0 270 < th dose independent rect. 2 10
883 103.43 wind 9.0 270 < th dose independent rect. 12 14
923 103.62 humidity 50.0 270 > th dose dependent rect. 15 20
948 103.74 temperature 30.0 270 < th dose independent sin 22 NA
980 103.88 humidity 50.0 90 > th dose dependent rect. 17 19
981 103.88 temperature 20.0 270 > th dose dependent rect. 6 20