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Os10g0333000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.15 (0.0171) R2 : 0.215
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.402 (0.0361) R2dN8 : 0.277 R2N8 : 0.215
σ : 0.323
deviance : 47.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.7 0.256 9.19 -0.699 0.335 -0.374 -0.783 -2.75 0.316 15.9 0.7073 1496 -- --
33.2 0.268 9.14 -0.464 0.339 -0.22 -0.919 -- 0.379 15.6 8.122 1614 -- --
30.07 0.255 9.19 -0.666 0.328 -0.189 -- -2.63 0.309 16 0.7029 1648 -- --
35.33 0.277 9.16 -0.489 0.322 -0.303 -- -- 0.38 16.2 8.08 10556 -- --
34.02 0.272 9.18 -0.622 -- 0.383 -- -1.99 0.317 -- 1 1918 -- --
34.32 0.275 9.15 -0.396 0.311 -- -1.05 -- 0.369 15.6 -- -- -- --
37.3 0.286 9.16 -0.414 0.326 -- -- -- 0.364 16.6 -- -- -- --
36.69 0.282 9.17 -0.563 -- 0.577 -- -- 0.319 -- 0.04001 2041 -- --
39.54 0.293 9.14 -- 0.305 -0.202 -- -- 0.452 16.2 20 12837 -- --
42.96 0.306 9.16 -0.427 -- -- -- -- 0.355 -- -- -- -- --
41.82 0.302 9.15 -- 0.334 -- -- -- 0.41 16.6 -- -- -- --
43.95 0.309 9.16 -- -- 0.563 -- -- 0.32 -- 0.22 2037 -- --
47.76 0.323 9.15 -- -- -- -- -- 0.402 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.11 temperature 15.0 270 > th dose independent rect. 10 14
3 29.38 precipitation 0.1 43200 > th dose dependent rect. 13 7
12 29.65 humidity 60.0 720 > th dose dependent rect. 11 7
26 29.78 precipitation 0.1 43200 < th dose independent rect. 17 3
27 29.78 precipitation 0.1 43200 > th dose dependent rect. 18 3
28 29.78 precipitation 0.1 43200 < th dose dependent rect. 17 3
30 29.79 precipitation 0.1 43200 > th dose independent rect. 17 3
33 29.81 humidity 70.0 720 > th dose independent rect. 12 14
39 29.84 temperature 30.0 720 < th dose dependent sin 21 NA
49 29.88 wind 3.0 4320 > th dose independent rect. 12 3
57 29.88 temperature 30.0 720 < th dose dependent rect. 10 8
58 29.88 temperature 30.0 720 < th dose dependent rect. 7 14
61 29.89 radiation 10.0 43200 > th dose independent rect. 8 3
62 29.89 temperature 30.0 270 < th dose independent rect. 12 23
63 29.90 wind 3.0 4320 > th dose independent rect. 13 1
82 29.93 radiation 10.0 43200 > th dose independent rect. 8 6
86 29.94 humidity 70.0 720 > th dose independent sin 17 NA
101 29.96 humidity 70.0 720 > th dose independent rect. 15 3
104 29.96 humidity 60.0 720 > th dose dependent rect. 15 2
111 29.97 humidity 50.0 720 > th dose dependent sin 22 NA
115 29.97 temperature 30.0 720 < th dose dependent rect. 7 12
117 29.98 humidity 70.0 720 > th dose independent rect. 12 6
122 29.99 humidity 90.0 720 > th dose independent rect. 15 2
124 29.99 temperature 20.0 720 > th dose independent rect. 11 6
153 30.04 precipitation 0.1 43200 > th dose independent rect. 13 5
154 30.04 temperature 15.0 10 > th dose independent rect. 12 15
156 30.04 humidity 70.0 720 > th dose independent rect. 6 17
157 30.04 humidity 60.0 720 > th dose dependent rect. 12 1
166 30.06 wind 3.0 4320 < th dose independent rect. 11 4
170 30.06 temperature 30.0 720 < th dose dependent rect. 13 5
172 30.06 humidity 50.0 720 > th dose dependent rect. 7 12
173 30.06 humidity 50.0 720 > th dose dependent rect. 6 16
175 30.07 precipitation 0.1 43200 < th dose independent rect. 13 5
182 30.07 precipitation 0.1 43200 < th dose dependent rect. 13 5
189 30.08 radiation 1.0 1440 > th dose independent rect. 17 22
196 30.09 temperature 30.0 720 < th dose dependent rect. 15 2
203 30.10 radiation 10.0 43200 > th dose independent rect. 10 1
209 30.11 humidity 90.0 720 < th dose independent rect. 11 6
211 30.11 precipitation 0.1 43200 > th dose independent rect. 13 8
212 30.11 precipitation 0.1 43200 < th dose independent rect. 13 8
217 30.11 precipitation 0.1 43200 < th dose dependent rect. 13 8
226 30.12 precipitation 0.1 43200 > th dose dependent sin 19 NA
285 30.17 temperature 15.0 270 > th dose independent rect. 20 18
297 30.18 wind 1.0 14400 > th dose independent rect. 10 1
322 30.20 temperature 30.0 270 < th dose independent sin 10 NA
336 30.21 wind 1.0 14400 < th dose dependent rect. 10 1
344 30.21 humidity 50.0 720 > th dose dependent rect. 11 15
346 30.21 precipitation 0.1 43200 > th dose dependent rect. 13 16
374 30.24 radiation 1.0 1440 < th dose independent rect. 17 22
385 30.25 temperature 30.0 720 < th dose independent rect. 6 13
394 30.26 wind 1.0 14400 < th dose independent rect. 5 1
403 30.26 humidity 90.0 720 > th dose dependent rect. 15 2
413 30.27 humidity 50.0 14400 > th dose independent rect. 15 18
419 30.27 temperature 10.0 720 > th dose dependent rect. 24 14
439 30.29 wind 1.0 14400 < th dose independent rect. 10 1
442 30.29 radiation 1.0 1440 > th dose independent rect. 17 18
460 30.30 precipitation 0.1 43200 < th dose independent rect. 19 2
468 30.30 precipitation 0.1 43200 < th dose dependent rect. 19 2
480 30.30 radiation 1.0 720 < th dose dependent rect. 5 20
481 30.31 wind 1.0 14400 > th dose independent rect. 5 1
485 30.31 temperature 30.0 720 < th dose independent rect. 7 10
488 30.31 temperature 30.0 720 < th dose independent rect. 6 21
489 30.31 temperature 30.0 270 < th dose independent rect. 10 23
490 30.31 wind 5.0 4320 < th dose dependent rect. 13 2
534 30.34 radiation 1.0 1440 > th dose independent sin 2 NA
543 30.34 precipitation 0.1 43200 > th dose dependent rect. 16 1
585 30.37 precipitation 0.1 43200 > th dose independent rect. 19 2
600 30.37 wind 1.0 43200 < th dose dependent rect. 3 6
607 30.38 wind 1.0 43200 > th dose independent rect. 13 11
608 30.38 humidity 50.0 14400 > th dose independent rect. 15 12
630 30.39 humidity 50.0 14400 > th dose independent rect. 15 9
638 30.39 humidity 90.0 720 > th dose dependent rect. 11 9
641 30.40 humidity 50.0 14400 > th dose independent rect. 15 2
642 30.40 wind 1.0 14400 < th dose independent rect. 2 4
644 30.40 humidity 50.0 14400 > th dose independent rect. 15 5
645 30.40 humidity 50.0 14400 > th dose independent rect. 15 7
647 30.40 precipitation 0.1 14400 < th dose independent rect. 5 9
657 30.40 precipitation 0.1 14400 < th dose dependent rect. 5 9
667 30.41 radiation 1.0 1440 < th dose independent rect. 17 18
692 30.43 humidity 90.0 720 > th dose independent rect. 11 9
699 30.43 humidity 90.0 720 > th dose dependent rect. 14 6
708 30.44 atmosphere 1000.0 270 > th dose independent rect. 5 10
729 30.45 radiation 1.0 1440 < th dose independent sin 2 NA
733 30.45 humidity 90.0 720 > th dose independent rect. 11 7
747 30.45 temperature 10.0 720 > th dose dependent rect. 2 11
753 30.46 precipitation 0.1 14400 < th dose independent rect. 7 7
756 30.46 radiation 1.0 1440 < th dose dependent sin 1 NA
763 30.46 precipitation 0.1 14400 < th dose dependent rect. 7 7
779 30.47 radiation 40.0 720 < th dose independent rect. 5 12
801 30.48 humidity 90.0 4320 > th dose independent rect. 12 2
822 30.49 wind 1.0 43200 < th dose independent rect. 13 11
828 30.49 radiation 1.0 1440 > th dose independent rect. 12 23
832 30.49 wind 3.0 4320 < th dose dependent rect. 9 6
841 30.50 atmosphere 1005.0 720 > th dose independent rect. 15 2
853 30.50 radiation 1.0 1440 > th dose independent rect. 5 14
876 30.50 temperature 10.0 720 > th dose dependent sin 5 NA
878 30.50 radiation 20.0 43200 < th dose dependent rect. 10 1
892 30.50 radiation 1.0 1440 < th dose dependent rect. 16 22
893 30.51 radiation 1.0 1440 > th dose independent no NA NA
911 30.51 temperature 15.0 10 > th dose independent rect. 22 17
959 30.51 wind 1.0 43200 < th dose dependent rect. 3 4
973 30.51 radiation 1.0 1440 < th dose dependent rect. 6 22