Os10g0331500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0331500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 234.18 | 0.719 | 2.91 | 0.0542 | 0.194 | 0.771 | -0.316 | 0.487 | -0.0316 | 13.9 | 19.78 | 325 | -- | -- |
| 234.61 | 0.713 | 2.89 | 0.12 | 0.158 | 0.691 | -0.341 | -- | -0.0121 | 14 | 19.8 | 417 | -- | -- |
| 234.52 | 0.713 | 2.91 | 0.0317 | 0.189 | 0.789 | -- | 0.592 | -0.0335 | 14 | 19.8 | 337 | -- | -- |
| 234.89 | 0.714 | 2.89 | 0.114 | 0.158 | 0.694 | -- | -- | -0.00637 | 14.8 | 20 | 438 | -- | -- |
| 236.06 | 0.716 | 2.91 | 0.0302 | -- | 0.763 | -- | 0.576 | -0.0355 | -- | 19.8 | 397 | -- | -- |
| 247.07 | 0.737 | 2.92 | -0.116 | 0.131 | -- | -0.29 | -- | -0.136 | 12.7 | -- | -- | -- | -- |
| 247.42 | 0.737 | 2.92 | -0.127 | 0.132 | -- | -- | -- | -0.138 | 12.7 | -- | -- | -- | -- |
| 236.26 | 0.716 | 2.9 | 0.0992 | -- | 0.675 | -- | -- | -0.0155 | -- | 19.96 | 449 | -- | -- |
| 235.18 | 0.714 | 2.9 | -- | 0.152 | 0.657 | -- | -- | -0.0264 | 14.7 | 19.94 | 438 | -- | -- |
| 248.51 | 0.737 | 2.92 | -0.132 | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
| 247.85 | 0.736 | 2.92 | -- | 0.134 | -- | -- | -- | -0.124 | 12.7 | -- | -- | -- | -- |
| 236.49 | 0.716 | 2.9 | -- | -- | 0.646 | -- | -- | -0.0309 | -- | 20 | 449 | -- | -- |
| 248.97 | 0.736 | 2.92 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.18 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 4 | 218.18 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 35 | 221.95 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 37 | 221.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 39 | 222.54 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 42 | 222.54 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 55 | 223.22 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 60 | 223.74 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 62 | 223.93 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 67 | 224.47 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 69 | 224.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 70 | 224.51 | humidity | 80.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 74 | 224.51 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 83 | 224.66 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 154 | 225.86 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 9 |
| 156 | 225.98 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 162 | 226.13 | radiation | 30.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 166 | 226.23 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 176 | 226.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 186 | 226.61 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 3 |
| 187 | 226.62 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 3 |
| 198 | 226.77 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 215 | 227.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 245 | 227.46 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 252 | 227.53 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 260 | 227.70 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 330 | 228.57 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 368 | 229.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 371 | 229.06 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 381 | 229.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 16 |
| 388 | 229.14 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 402 | 229.31 | temperature | 20.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 438 | 229.65 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 10 |
| 442 | 229.67 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 16 |
| 444 | 229.68 | humidity | 80.0 | 30 | > th | dose independent | rect. | 17 | 17 |
| 458 | 229.78 | temperature | 15.0 | 4320 | < th | dose independent | sin | 23 | NA |
| 460 | 229.78 | humidity | 60.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 535 | 230.26 | radiation | 1.0 | 30 | < th | dose independent | rect. | 6 | 2 |
| 542 | 230.27 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 6 | 3 |
| 560 | 230.38 | radiation | 1.0 | 30 | < th | dose independent | rect. | 6 | 8 |
| 572 | 230.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 586 | 230.50 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 17 | 17 |
| 641 | 230.71 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 2 |
| 643 | 230.72 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 658 | 230.83 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 660 | 230.83 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 668 | 230.88 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 694 | 231.06 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 7 |
| 703 | 231.08 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 712 | 231.11 | humidity | 80.0 | 30 | > th | dose independent | rect. | 17 | 21 |
| 748 | 231.27 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 761 | 231.31 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 6 | 2 |
| 765 | 231.32 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 13 |
| 766 | 231.32 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 809 | 231.50 | humidity | 80.0 | 720 | < th | dose independent | sin | 10 | NA |
| 843 | 231.61 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 849 | 231.63 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 858 | 231.67 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 871 | 231.73 | humidity | 80.0 | 30 | < th | dose independent | sin | 9 | NA |
| 877 | 231.74 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 24 | 7 |
| 901 | 231.86 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 923 | 231.93 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 969 | 232.08 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 984 | 232.12 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |