Os10g0330300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0330300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.97 | 0.248 | 10.1 | -0.878 | 0.356 | 0.601 | 0.216 | -1.38 | 0.0874 | 7.27 | 19.83 | 1771 | -- | -- |
| 29.33 | 0.252 | 10.1 | -0.519 | 0.348 | 0.661 | 0.364 | -- | 0.194 | 7.04 | 15.4 | 1772 | -- | -- |
| 28.01 | 0.247 | 10.1 | -0.962 | 0.374 | 0.618 | -- | -1.7 | 0.0655 | 7.39 | 21.02 | 1855 | -- | -- |
| 29.48 | 0.253 | 10.1 | -0.509 | 0.346 | 0.695 | -- | -- | 0.189 | 7.36 | 14.18 | 1774 | -- | -- |
| 33.4 | 0.269 | 10.1 | -0.749 | -- | 0.621 | -- | -1.06 | 0.113 | -- | 17.51 | 1413 | -- | -- |
| 37.32 | 0.286 | 10 | -0.29 | 0.313 | -- | 0.259 | -- | 0.318 | 7.2 | -- | -- | -- | -- |
| 37.49 | 0.287 | 10 | -0.284 | 0.313 | -- | -- | -- | 0.318 | 7.32 | -- | -- | -- | -- |
| 34.43 | 0.273 | 10.1 | -0.499 | -- | 0.692 | -- | -- | 0.195 | -- | 14.17 | 1398 | -- | -- |
| 35.09 | 0.276 | 10 | -- | 0.334 | 0.364 | -- | -- | 0.286 | 7.43 | 21.16 | 1789 | -- | -- |
| 42.68 | 0.305 | 10.1 | -0.279 | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
| 39.62 | 0.294 | 10 | -- | 0.31 | -- | -- | -- | 0.35 | 7.38 | -- | -- | -- | -- |
| 39.92 | 0.294 | 10.1 | -- | -- | 0.357 | -- | -- | 0.285 | -- | 21.2 | 1349 | -- | -- |
| 44.73 | 0.312 | 10 | -- | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 38 | 26.95 | temperature | 15 | 90 | > th | dose dependent | sin | 16 | NA |
| 49 | 27.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 137 | 27.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 144 | 28.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 11 |
| 166 | 28.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 167 | 28.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 188 | 28.09 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 214 | 28.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 411 | 28.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 22 |
| 415 | 28.31 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 430 | 28.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 22 |
| 487 | 28.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 504 | 28.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 540 | 28.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 555 | 28.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 15 |
| 569 | 28.40 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 572 | 28.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 629 | 28.43 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 634 | 28.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 731 | 28.49 | temperature | 30 | 30 | < th | dose dependent | sin | 16 | NA |