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Os10g0330000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.6 (0.029) R2 : 0.898
β1 : -1.66 (0.106) R2dD : 0.0569 R2D : 0.027
β2 : 2.86 (0.0989) R2dC : 0.327 R2C : 0.648
β3 : 2.02 (0.0927) R2dE : 0.187 R2E : 0.475
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.707 (0.0625) R2dN8 : 0.0392 R2N8 : 0.00741
σ : 0.542
deviance : 135.47
__
_____
C
peak time of C : 16.8
E
wheather : temperature
threshold : 6.865
memory length : 31
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.12
open length of G : 13.8

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
123.44 0.522 14.6 -1.65 3 1.78 2.06 0.164 -0.691 16.6 7.517 31 6.1 13.8
123.42 0.517 14.6 -1.64 2.99 1.8 2.18 -- -0.7 16.6 6.375 31 6.08 13.8
128.85 0.529 14.6 -1.55 2.85 1.98 -- 1.55 -0.668 16.7 6.078 28 6.18 13.7
135.47 0.542 14.6 -1.66 2.86 2.02 -- -- -0.707 16.8 6.865 31 6.12 13.8
166.9 0.602 14.6 -1.92 -- 3.97 -- 0.794 -0.651 -- -19.94 370 5.54 13.6
160.3 0.594 14.6 -1.5 4.35 -- 2.7 -- -0.528 15.7 -- -- -- --
182.22 0.632 14.6 -1.46 4.37 -- -- -- -0.513 15.7 -- -- -- --
158.72 0.587 14.6 -1.81 -- 4.57 -- -- -0.659 -- -9.983 435 5.32 12.9
205.36 0.667 14.6 -- 3.08 1.7 -- -- -0.487 16.6 3.998 41 6.33 13.5
1238.7 1.64 14.6 -1.64 -- -- -- -- -0.629 -- -- -- -- --
238.07 0.722 14.5 -- 4.4 -- -- -- -0.351 15.7 -- -- -- --
232.95 0.711 14.5 -- -- 4.38 -- -- -0.429 -- -21.87 441 5.51 12.7
1309.46 1.69 14.5 -- -- -- -- -- -0.447 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 124.30 temperature 10.0 30 > th dose dependent rect. 6 14
3 126.66 temperature 10.0 720 > th dose dependent rect. 6 3
8 127.52 temperature 20.0 720 > th dose dependent rect. 6 1
9 127.75 temperature 15.0 10 > th dose independent rect. 20 10
12 128.66 atmosphere 1010.0 10 < th dose independent rect. 20 10
19 130.17 temperature 10.0 10 > th dose dependent rect. 20 10
34 132.72 temperature 20.0 720 > th dose independent rect. 6 1
37 132.95 humidity 70.0 270 > th dose independent rect. 17 12
40 133.04 temperature 30.0 270 < th dose independent rect. 17 12
41 133.19 temperature 20.0 720 > th dose dependent rect. 8 1
42 133.28 precipitation 0.1 30 < th dose independent rect. 6 14
43 133.28 precipitation 0.1 30 < th dose dependent rect. 6 14
47 133.39 temperature 20.0 720 > th dose independent rect. 6 3
54 133.77 wind 9.0 10 < th dose independent rect. 6 14
58 133.95 temperature 15.0 720 > th dose independent rect. 18 3
66 134.40 wind 1.0 30 > th dose independent rect. 6 14
68 134.49 wind 9.0 10 < th dose independent rect. 20 10
70 134.52 temperature 30.0 10 < th dose independent rect. 20 10
71 134.52 humidity 50.0 10 > th dose independent rect. 20 10
74 134.52 atmosphere 995.0 10 > th dose independent rect. 20 10
75 134.52 radiation 20.0 10 < th dose independent rect. 20 10
78 134.52 temperature 10.0 10 > th dose independent rect. 6 14
80 134.52 atmosphere 1015.0 10 < th dose independent rect. 6 14
86 134.77 humidity 70.0 90 > th dose independent rect. 19 11
114 135.44 temperature 10.0 1440 > th dose independent rect. 21 10
117 135.44 temperature 30.0 1440 < th dose independent rect. 21 10
121 135.44 humidity 50.0 1440 > th dose independent rect. 21 10
126 135.44 atmosphere 995.0 1440 > th dose independent rect. 21 10
127 135.44 radiation 40.0 1440 < th dose independent rect. 21 10
131 135.44 temperature 10.0 1440 > th dose independent rect. 7 14
134 135.47 temperature 15.0 720 > th dose independent rect. 11 10
138 135.73 atmosphere 995.0 10 > th dose independent rect. 6 14
151 136.11 precipitation 0.1 30 < th dose independent rect. 20 10
152 136.11 precipitation 0.1 30 < th dose dependent rect. 20 10
158 136.25 atmosphere 1005.0 10 > th dose dependent rect. 20 3
162 136.34 radiation 40.0 720 < th dose independent rect. 23 10
175 136.74 humidity 70.0 10 > th dose independent rect. 18 12
177 136.85 temperature 15.0 270 > th dose independent rect. 17 12
182 137.04 temperature 15.0 1440 > th dose independent rect. 21 1
189 137.22 radiation 40.0 720 < th dose independent rect. 6 3
195 137.40 temperature 25.0 30 > th dose dependent rect. 20 9
210 137.72 temperature 15.0 720 > th dose independent rect. 9 12
214 137.73 radiation 40.0 30 < th dose dependent rect. 20 10
234 138.16 temperature 15.0 30 > th dose independent rect. 21 23
241 138.27 wind 9.0 30 < th dose dependent rect. 20 10
242 138.33 temperature 20.0 720 > th dose independent rect. 23 10
243 138.34 atmosphere 1010.0 720 < th dose independent rect. 18 3
252 138.47 humidity 50.0 10 > th dose independent rect. 6 14
257 138.53 wind 1.0 270 > th dose independent rect. 4 13
260 138.55 humidity 50.0 10 > th dose dependent rect. 20 10
273 138.58 radiation 10.0 270 < th dose dependent rect. 17 12
274 138.59 radiation 10.0 720 < th dose dependent rect. 17 4
288 138.84 radiation 40.0 720 < th dose independent rect. 21 12
311 139.22 atmosphere 1005.0 30 > th dose dependent rect. 18 5
314 139.27 humidity 50.0 720 > th dose independent rect. 17 4
315 139.28 temperature 25.0 720 > th dose independent rect. 8 1
344 139.60 atmosphere 995.0 720 > th dose independent rect. 18 3
351 139.65 temperature 25.0 270 > th dose dependent rect. 18 8
355 139.72 temperature 30.0 720 < th dose independent rect. 11 1
356 139.74 atmosphere 1005.0 30 > th dose independent rect. 20 3
360 139.77 temperature 25.0 30 > th dose independent rect. 20 10
398 139.96 radiation 30.0 10 < th dose independent rect. 23 12
413 140.11 temperature 25.0 30 > th dose independent rect. 20 3
419 140.16 humidity 60.0 720 > th dose independent rect. 6 3
420 140.17 humidity 60.0 720 > th dose independent rect. 23 10
424 140.19 radiation 40.0 10 < th dose dependent rect. 6 5
431 140.26 radiation 1.0 720 < th dose independent rect. 18 3
445 140.37 atmosphere 995.0 10 > th dose dependent rect. 20 10
453 140.46 temperature 20.0 720 > th dose dependent sin 7 NA
459 140.49 temperature 15.0 30 > th dose independent rect. 11 19
464 140.56 humidity 80.0 30 > th dose independent rect. 20 3
467 140.57 humidity 50.0 720 > th dose independent rect. 21 14
477 140.66 radiation 40.0 30 < th dose independent rect. 6 14
482 140.68 wind 5.0 720 < th dose dependent rect. 2 3
483 140.68 wind 9.0 720 < th dose dependent rect. 1 5
485 140.69 temperature 25.0 30 > th dose independent rect. 1 19
498 140.78 temperature 25.0 10 > th dose independent rect. 6 5
512 140.90 atmosphere 1010.0 720 < th dose independent rect. 18 5
514 140.93 precipitation 0.1 720 < th dose independent rect. 6 3
516 140.93 precipitation 0.1 720 < th dose dependent rect. 6 3
517 140.95 wind 9.0 720 < th dose independent rect. 6 3
520 140.95 atmosphere 995.0 720 > th dose independent rect. 6 3
521 140.95 atmosphere 1015.0 720 < th dose independent rect. 6 3
524 140.95 temperature 10.0 720 > th dose independent rect. 9 21
529 140.96 wind 1.0 30 > th dose independent rect. 23 21
536 141.01 wind 3.0 720 < th dose dependent rect. 4 1
538 141.02 humidity 70.0 30 > th dose independent rect. 14 16
540 141.03 radiation 1.0 270 < th dose dependent rect. 24 23
549 141.08 temperature 30.0 720 < th dose dependent rect. 3 2
559 141.11 temperature 25.0 30 > th dose independent rect. 20 5
561 141.12 temperature 10.0 720 > th dose independent rect. 23 10
563 141.12 atmosphere 995.0 720 > th dose independent rect. 23 10
573 141.15 wind 9.0 720 < th dose independent rect. 23 10
577 141.18 radiation 30.0 10 < th dose independent rect. 6 5
578 141.18 radiation 1.0 270 < th dose independent rect. 17 12
579 141.18 wind 9.0 720 < th dose independent rect. 21 14
582 141.21 atmosphere 1015.0 720 < th dose independent rect. 11 10
587 141.22 radiation 20.0 720 < th dose independent rect. 18 3
590 141.22 temperature 10.0 720 > th dose independent rect. 21 21
600 141.27 wind 9.0 720 < th dose independent rect. 18 3
608 141.32 temperature 10.0 720 > th dose independent rect. 21 14
609 141.32 atmosphere 995.0 720 > th dose independent rect. 21 14
613 141.36 atmosphere 995.0 30 > th dose dependent rect. 11 12
633 141.49 atmosphere 995.0 720 > th dose dependent rect. 11 1
637 141.51 humidity 80.0 90 > th dose independent rect. 20 1
638 141.51 atmosphere 995.0 720 > th dose independent rect. 18 18
651 141.61 temperature 10.0 30 > th dose dependent rect. 23 21
653 141.62 radiation 1.0 720 < th dose dependent rect. 3 18
661 141.68 wind 1.0 90 > th dose independent rect. 23 12
664 141.70 humidity 90.0 30 < th dose independent rect. 6 14
677 141.77 humidity 60.0 30 > th dose independent rect. 23 12
695 141.90 humidity 50.0 720 > th dose dependent rect. 23 1
697 141.91 atmosphere 1015.0 720 < th dose independent rect. 9 12
698 141.92 humidity 50.0 720 > th dose independent rect. 24 21
707 141.95 temperature 25.0 30 > th dose dependent rect. 20 3
726 142.03 wind 9.0 720 < th dose independent rect. 21 12
744 142.18 radiation 40.0 720 < th dose independent rect. 15 18
760 142.25 precipitation 0.1 720 < th dose independent rect. 21 21
762 142.25 precipitation 0.1 720 < th dose dependent rect. 21 21
767 142.30 atmosphere 1005.0 30 > th dose dependent rect. 15 8
782 142.38 wind 3.0 720 < th dose independent rect. 2 3
793 142.44 temperature 20.0 30 > th dose dependent rect. 6 5
801 142.47 radiation 1.0 720 > th dose independent rect. 11 1
802 142.47 precipitation 0.1 720 < th dose independent rect. 23 1
804 142.47 precipitation 0.1 270 < th dose independent rect. 13 12
805 142.47 precipitation 0.1 720 < th dose dependent rect. 23 1
806 142.47 precipitation 0.1 270 < th dose dependent rect. 13 12
814 142.52 temperature 30.0 720 < th dose dependent rect. 2 10
820 142.53 radiation 1.0 270 < th dose dependent rect. 17 18
824 142.55 precipitation 0.1 720 < th dose independent rect. 24 6
826 142.55 precipitation 0.1 720 < th dose dependent rect. 24 6
831 142.60 precipitation 0.1 720 < th dose independent rect. 6 18
834 142.60 precipitation 0.1 720 < th dose dependent rect. 6 18
837 142.62 temperature 10.0 1440 > th dose independent rect. 12 12
840 142.62 temperature 10.0 1440 > th dose independent rect. 24 12
843 142.62 atmosphere 995.0 1440 > th dose independent rect. 24 12
845 142.62 temperature 25.0 720 < th dose dependent rect. 3 6
848 142.63 temperature 10.0 720 > th dose independent rect. 11 1
849 142.63 atmosphere 995.0 720 > th dose independent rect. 11 1
850 142.63 atmosphere 1015.0 720 < th dose independent rect. 11 1
851 142.63 precipitation 0.1 720 < th dose independent rect. 11 1
852 142.63 temperature 10.0 720 > th dose independent rect. 12 23
853 142.63 precipitation 0.1 720 < th dose dependent rect. 11 1
861 142.70 wind 1.0 720 > th dose independent rect. 18 3
862 142.70 precipitation 0.1 720 < th dose independent rect. 21 5
863 142.70 precipitation 0.1 720 < th dose dependent rect. 21 5
868 142.70 temperature 20.0 30 > th dose dependent rect. 1 19
871 142.72 wind 9.0 720 < th dose independent rect. 23 1
872 142.72 temperature 10.0 720 > th dose independent rect. 23 1
873 142.72 temperature 30.0 720 < th dose independent rect. 23 1
874 142.72 humidity 50.0 720 > th dose independent rect. 23 1
877 142.72 atmosphere 995.0 720 > th dose independent rect. 23 1
878 142.72 radiation 1.0 720 < th dose independent rect. 23 1
883 142.72 temperature 10.0 720 > th dose independent rect. 24 23
884 142.72 radiation 1.0 720 < th dose dependent rect. 23 1
895 142.75 wind 1.0 720 > th dose independent rect. 11 1
903 142.77 atmosphere 995.0 720 > th dose independent rect. 17 13
904 142.77 atmosphere 1005.0 270 > th dose dependent rect. 18 1
923 142.80 radiation 1.0 270 < th dose independent rect. 8 21
926 142.82 wind 9.0 30 < th dose independent rect. 23 12
927 142.82 temperature 10.0 30 > th dose independent rect. 11 12
929 142.82 temperature 10.0 30 > th dose independent rect. 23 12
931 142.82 atmosphere 995.0 30 > th dose independent rect. 23 12
932 142.82 atmosphere 1015.0 30 < th dose independent rect. 11 12
939 142.84 radiation 40.0 10 < th dose dependent rect. 23 12
952 142.89 precipitation 0.1 720 < th dose independent rect. 12 6
954 142.89 wind 9.0 720 < th dose independent rect. 21 21
955 142.89 precipitation 0.1 720 < th dose dependent rect. 12 6
969 142.98 precipitation 0.1 720 < th dose independent rect. 21 12
971 142.98 precipitation 0.1 720 < th dose dependent rect. 21 12
978 143.00 temperature 20.0 30 > th dose dependent rect. 3 17
985 143.02 atmosphere 1005.0 30 > th dose dependent rect. 13 10
994 143.05 radiation 1.0 720 < th dose dependent sin 17 NA
996 143.06 atmosphere 1005.0 30 > th dose dependent rect. 11 12