Os10g0329700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os10g0329700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.82 | 0.625 | 5.33 | 0.876 | 0.635 | 2.33 | 1.21 | 0.869 | 0.342 | 1.38 | 21 | 6684 | -- | -- |
| 178.35 | 0.622 | 5.36 | 0.868 | 0.635 | 2.18 | 1.35 | -- | 0.342 | 1.11 | 21 | 6752 | -- | -- |
| 182.46 | 0.629 | 5.32 | 0.922 | 0.637 | 2.33 | -- | 1.11 | 0.357 | 1.68 | 21 | 6706 | -- | -- |
| 182.85 | 0.63 | 5.38 | 0.751 | 0.643 | 2.13 | -- | -- | 0.287 | 1.84 | 21.46 | 6783 | -- | -- |
| 207.09 | 0.67 | 5.32 | 0.847 | -- | 2.43 | -- | 1.12 | 0.333 | -- | 21.01 | 6787 | -- | -- |
| 275.06 | 0.778 | 5.21 | 2.26 | 0.722 | -- | 1.26 | -- | 1.05 | 1.29 | -- | -- | -- | -- |
| 281.2 | 0.785 | 5.21 | 2.21 | 0.731 | -- | -- | -- | 1.04 | 1.74 | -- | -- | -- | -- |
| 208.03 | 0.672 | 5.37 | 0.751 | -- | 2.18 | -- | -- | 0.277 | -- | 21.42 | 6783 | -- | -- |
| 190.78 | 0.643 | 5.41 | -- | 0.639 | 2.54 | -- | -- | 0.124 | 1.81 | 20.94 | 6826 | -- | -- |
| 313.66 | 0.828 | 5.2 | 2.24 | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
| 409.9 | 0.947 | 5.26 | -- | 0.771 | -- | -- | -- | 0.791 | 1.83 | -- | -- | -- | -- |
| 215.37 | 0.684 | 5.41 | -- | -- | 2.59 | -- | -- | 0.112 | -- | 20.9 | 6826 | -- | -- |
| 445.97 | 0.986 | 5.25 | -- | -- | -- | -- | -- | 0.805 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.49 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 2 | 169.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 10 | 172.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 139 | 177.28 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 140 | 177.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 144 | 177.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 220 | 178.26 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 391 | 179.43 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 394 | 179.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 13 |
| 412 | 179.56 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 566 | 180.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 595 | 180.33 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 658 | 180.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 887 | 181.32 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 966 | 181.50 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 986 | 181.55 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |