Os10g0328100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0328100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.57 | 0.31 | 10.7 | 1.02 | 0.432 | 0.761 | 0.427 | 0.249 | 0.642 | 18.4 | 20.8 | 1577 | -- | -- |
| 43.5 | 0.307 | 10.7 | 1 | 0.404 | 0.675 | 0.475 | -- | 0.616 | 18.2 | 21.31 | 1918 | -- | -- |
| 43.89 | 0.309 | 10.7 | 1.01 | 0.403 | 0.735 | -- | 0.286 | 0.627 | 18.4 | 21.1 | 1893 | -- | -- |
| 43.98 | 0.309 | 10.7 | 0.96 | 0.417 | 0.678 | -- | -- | 0.62 | 18.3 | 21.4 | 1918 | -- | -- |
| 52.37 | 0.337 | 10.7 | 1.04 | -- | 0.72 | -- | 0.355 | 0.623 | -- | 21.5 | 1958 | -- | -- |
| 56.36 | 0.352 | 10.7 | 1.28 | 0.429 | -- | 0.524 | -- | 0.811 | 18.4 | -- | -- | -- | -- |
| 57.02 | 0.354 | 10.7 | 1.27 | 0.431 | -- | -- | -- | 0.812 | 18.6 | -- | -- | -- | -- |
| 52.59 | 0.338 | 10.7 | 0.94 | -- | 0.698 | -- | -- | 0.597 | -- | 21.5 | 1958 | -- | -- |
| 51.08 | 0.333 | 10.7 | -- | 0.434 | 1.17 | -- | -- | 0.433 | 18.5 | 17.23 | 47520 | -- | -- |
| 66.71 | 0.382 | 10.7 | 1.26 | -- | -- | -- | -- | 0.803 | -- | -- | -- | -- | -- |
| 99.4 | 0.466 | 10.7 | -- | 0.416 | -- | -- | -- | 0.671 | 18.8 | -- | -- | -- | -- |
| 60.88 | 0.363 | 10.7 | -- | -- | 1.16 | -- | -- | 0.427 | -- | 17.23 | 47520 | -- | -- |
| 108.44 | 0.486 | 10.7 | -- | -- | -- | -- | -- | 0.664 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 3 | 43.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 5 | 43.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 6 | 43.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 7 |
| 13 | 43.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 16 | 43.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 4 |
| 22 | 43.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 30 | 43.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 47 | 43.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 71 | 43.90 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 77 | 43.90 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 22 |
| 78 | 43.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 89 | 43.93 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 125 | 44.01 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 128 | 44.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 197 | 44.13 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 202 | 44.14 | temperature | 25 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 258 | 44.22 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 293 | 44.27 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 311 | 44.31 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 528 | 44.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 606 | 44.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 616 | 44.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 669 | 44.73 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 794 | 44.82 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 853 | 44.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 927 | 44.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |