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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0326700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.37 (0.0268) R2 : 0.239
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.18 (0.435) R2dE : 0.237 R2E : 0.238
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0455 (0.0565) R2dN8 : 0.0014 R2N8 : 0.00228
σ : 0.506
deviance : 117.04
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 999.2
memory length : 2
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 9.19
open length of G : 2.26

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.44 0.5 3.47 -0.49 0.0797 24.8 0.3 -116 -0.0374 11.1 1000 10 8.01 3
120.69 0.516 3.37 0.049 0.0771 4.05 0.239 -- -0.0327 12.1 1000 10 8.01 3
113.75 0.497 3.47 -0.479 0.0746 24.8 -- -116 -0.0394 12.7 1000 10 8 2.99
116.47 0.506 3.37 0.0736 0.0838 5.13 -- -- -0.0366 12.5 999.2 2 8.95 1.98
114.18 0.498 3.47 -0.479 -- 24.8 -- -116 -0.0394 -- 1000 10 8 2.99
150.76 0.576 3.37 0.102 0.146 -- 0.505 -- -0.0581 10.4 -- -- -- --
151.73 0.577 3.37 0.124 0.145 -- -- -- -0.0559 11.2 -- -- -- --
116.91 0.506 3.37 0.0701 -- 5.17 -- -- -0.0378 -- 999.2 2 9.21 2.24
116.61 0.506 3.37 -- 0.0825 5.15 -- -- -0.0447 12.4 999.2 2 9.05 2.39
153.04 0.578 3.38 0.12 -- -- -- -- -0.0572 -- -- -- -- --
152.14 0.577 3.37 -- 0.143 -- -- -- -0.0697 11.2 -- -- -- --
117.04 0.506 3.37 -- -- 5.18 -- -- -0.0455 -- 999.2 2 9.19 2.26
153.42 0.578 3.38 -- -- -- -- -- -0.0705 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.49 atmosphere 1000 10 < th dose dependent rect. 8 3
3 113.52 atmosphere 1000 90 < th dose dependent rect. 8 1
4 113.57 atmosphere 1000 10 < th dose independent rect. 8 3
6 113.60 atmosphere 1000 90 < th dose independent rect. 8 1
13 113.68 atmosphere 1000 10 < th dose dependent rect. 10 1
57 127.88 atmosphere 1000 10 < th dose dependent rect. 6 5
92 130.63 temperature 30 90 > th dose dependent rect. 18 16
107 131.77 temperature 30 90 > th dose independent rect. 18 16
113 131.96 temperature 30 90 > th dose dependent rect. 8 1
131 132.03 temperature 30 90 > th dose independent rect. 8 1
281 134.24 humidity 90 14400 > th dose dependent rect. 22 3
286 134.53 humidity 90 14400 > th dose dependent rect. 21 5
289 134.59 humidity 90 14400 > th dose dependent rect. 20 7
291 134.60 humidity 90 14400 > th dose dependent rect. 23 1
348 135.13 humidity 90 14400 > th dose dependent rect. 18 14
354 135.24 humidity 90 14400 > th dose dependent sin 12 NA
444 135.74 temperature 10 270 > th dose dependent rect. 10 11
504 136.08 radiation 40 4320 < th dose independent rect. 7 2
512 136.13 radiation 40 4320 < th dose independent rect. 22 11
518 136.15 radiation 40 4320 < th dose independent rect. 19 14
523 136.16 radiation 40 4320 < th dose independent rect. 24 9
561 136.33 humidity 90 14400 > th dose dependent rect. 5 2
575 136.43 humidity 90 14400 > th dose dependent rect. 4 4
599 136.55 radiation 1 1440 < th dose dependent rect. 18 16
604 136.60 radiation 1 1440 < th dose dependent rect. 5 5
618 136.64 radiation 1 1440 < th dose dependent rect. 24 10
652 136.75 temperature 15 270 > th dose dependent rect. 10 19
657 136.77 temperature 30 10 < th dose dependent rect. 10 16
667 136.81 humidity 90 14400 > th dose dependent no NA NA
699 136.88 radiation 1 14400 > th dose independent rect. 18 13
745 137.03 temperature 30 90 < th dose dependent rect. 9 17
748 137.04 radiation 1 14400 < th dose independent rect. 18 13
754 137.05 temperature 15 30 > th dose dependent rect. 10 23
789 137.12 humidity 90 14400 > th dose dependent rect. 2 23
791 137.15 radiation 1 1440 < th dose dependent sin 9 NA
809 137.22 temperature 30 1440 < th dose dependent rect. 7 1
814 137.23 temperature 15 1440 > th dose dependent rect. 7 1
817 137.24 humidity 60 4320 < th dose dependent rect. 17 3
855 137.32 temperature 30 90 < th dose dependent rect. 7 19
867 137.38 radiation 1 14400 > th dose independent rect. 5 2
871 137.40 radiation 1 14400 < th dose independent rect. 5 2
873 137.41 radiation 1 4320 < th dose dependent rect. 6 1
886 137.44 radiation 1 14400 < th dose independent rect. 23 8
895 137.45 wind 9 43200 > th dose independent rect. 8 6
896 137.45 radiation 1 14400 < th dose independent rect. 1 6
909 137.47 humidity 90 1440 > th dose dependent rect. 6 5
918 137.50 wind 9 43200 > th dose independent rect. 24 14
927 137.54 wind 9 43200 > th dose independent rect. 2 12
928 137.55 wind 9 43200 < th dose independent rect. 2 12
930 137.56 wind 9 43200 > th dose dependent rect. 10 5
936 137.57 wind 9 43200 < th dose independent rect. 24 14
940 137.58 temperature 10 720 > th dose dependent rect. 18 19
941 137.58 temperature 30 270 < th dose dependent rect. 5 20
942 137.58 temperature 10 720 > th dose dependent rect. 17 21
952 137.60 wind 9 43200 > th dose independent rect. 4 10
953 137.60 wind 9 43200 < th dose independent rect. 4 10
976 137.64 wind 9 43200 < th dose independent rect. 8 6