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Os10g0324600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, U1-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.71 (0.0134) R2 : 0.00169
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0248 (0.0281) R2dN8 : 0.00219 R2N8 : 0.00169
σ : 0.252
deviance : 29.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.18 0.195 9.67 0.269 0.248 -0.447 -0.139 1 0.0846 4.37 20.69 60 -- --
17.64 0.196 9.69 0.114 0.258 -0.474 -0.411 -- 0.0373 3.97 15.39 68 -- --
17.22 0.193 9.67 0.286 0.247 -0.447 -- 1.09 0.0909 4.45 20.57 60 -- --
18.14 0.198 9.69 0.113 0.262 -0.497 -- -- 0.0382 4.47 13.95 62 -- --
19.5 0.206 9.66 0.364 -- -0.655 -- 1.25 0.136 -- 20.92 69 -- --
20.15 0.21 9.71 0.00676 0.394 -- -0.368 -- -0.0341 3.73 -- -- -- --
20.54 0.212 9.71 0.0124 0.394 -- -- -- -0.0321 3.91 -- -- -- --
20.73 0.212 9.69 0.164 -- -0.661 -- -- 0.0765 -- 17.3 86 -- --
18.44 0.2 9.7 -- 0.278 -0.441 -- -- 0.0184 4.38 13.19 60 -- --
29.05 0.252 9.71 0.0286 -- -- -- -- -0.0216 -- -- -- -- --
20.54 0.212 9.71 -- 0.394 -- -- -- -0.0335 3.91 -- -- -- --
21.43 0.216 9.69 -- -- -0.609 -- -- 0.0546 -- 17.4 70 -- --
29.07 0.252 9.71 -- -- -- -- -- -0.0248 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.53 temperature 15 10 > th dose dependent rect. 9 20
2 15.54 temperature 15 90 > th dose dependent rect. 8 20
15 15.77 temperature 10 270 > th dose dependent rect. 6 21
58 16.25 temperature 15 30 > th dose dependent rect. 20 23
99 16.53 temperature 30 90 < th dose dependent rect. 11 22
108 16.60 temperature 30 30 < th dose dependent rect. 5 15
131 16.73 temperature 30 90 < th dose dependent rect. 15 17
155 16.83 temperature 10 90 > th dose dependent rect. 8 10
170 16.86 temperature 30 10 < th dose dependent rect. 5 19
171 16.87 temperature 10 10 > th dose dependent rect. 9 10
185 16.90 radiation 1 30 > th dose independent rect. 9 10
202 16.91 temperature 30 90 < th dose dependent rect. 4 19
229 16.95 temperature 30 10 < th dose dependent rect. 3 23
235 16.97 temperature 15 10 > th dose dependent rect. 9 13
240 16.98 humidity 50 90 > th dose dependent rect. 5 15
246 16.98 temperature 30 10 < th dose dependent rect. 12 21
252 16.99 temperature 30 10 < th dose dependent rect. 3 21
276 17.04 radiation 1 720 < th dose dependent rect. 7 16
312 17.09 temperature 25 720 < th dose independent rect. 17 4
317 17.10 radiation 1 270 < th dose dependent rect. 4 14
324 17.11 radiation 1 270 > th dose independent sin 0 NA
325 17.11 wind 9 1440 < th dose independent rect. 6 4
326 17.11 temperature 25 720 > th dose dependent rect. 15 3
333 17.11 temperature 30 30 < th dose dependent rect. 1 23
351 17.12 temperature 30 10 < th dose dependent rect. 10 23
369 17.16 temperature 25 720 < th dose independent rect. 15 6
382 17.17 radiation 1 720 < th dose dependent rect. 17 6
383 17.17 radiation 1 720 < th dose dependent rect. 15 8
390 17.18 radiation 1 720 < th dose dependent rect. 5 19
394 17.19 temperature 25 720 < th dose independent rect. 9 14
402 17.20 temperature 25 720 > th dose dependent rect. 15 6
429 17.22 temperature 20 270 > th dose dependent rect. 20 7
444 17.24 wind 1 10 > th dose independent rect. 18 15
445 17.24 radiation 1 720 < th dose independent rect. 7 16
452 17.24 temperature 30 30 < th dose dependent rect. 21 23
454 17.25 humidity 90 10 < th dose independent rect. 9 9
457 17.26 temperature 25 720 < th dose independent rect. 18 1
469 17.27 temperature 20 30 > th dose dependent no NA NA
474 17.28 radiation 1 270 < th dose independent rect. 4 14
478 17.28 humidity 90 30 < th dose dependent rect. 9 10
483 17.28 radiation 1 270 < th dose dependent rect. 3 17
510 17.30 temperature 30 10 < th dose dependent rect. 13 23
558 17.35 humidity 60 30 > th dose independent rect. 5 15
559 17.35 temperature 30 10 < th dose independent rect. 16 17
576 17.36 radiation 1 720 < th dose independent rect. 17 6
579 17.36 radiation 1 270 < th dose independent rect. 3 17
592 17.37 radiation 1 720 < th dose independent rect. 15 8
594 17.37 temperature 30 30 < th dose independent rect. 18 15
596 17.37 radiation 1 270 < th dose independent rect. 2 21
599 17.37 radiation 1 720 < th dose dependent sin 19 NA
612 17.38 humidity 60 90 > th dose independent rect. 17 15
614 17.38 radiation 1 270 < th dose dependent sin 0 NA
629 17.39 radiation 1 270 < th dose independent sin 0 NA
638 17.39 temperature 30 30 < th dose dependent no NA NA
654 17.40 radiation 20 270 < th dose dependent rect. 3 11
661 17.40 radiation 10 90 < th dose dependent rect. 5 19
683 17.42 temperature 25 720 < th dose independent sin 19 NA
686 17.42 humidity 60 270 > th dose independent rect. 15 16
696 17.42 humidity 50 10 > th dose dependent rect. 5 19
699 17.42 temperature 20 90 > th dose dependent rect. 23 23
721 17.43 temperature 20 90 > th dose dependent rect. 16 23
723 17.44 radiation 1 720 > th dose independent rect. 15 4
725 17.44 temperature 25 720 > th dose independent rect. 15 6
760 17.45 humidity 70 10 > th dose independent rect. 16 17
764 17.45 temperature 25 720 > th dose dependent rect. 15 19
792 17.46 radiation 30 90 < th dose dependent rect. 5 10
801 17.46 temperature 20 10 > th dose dependent rect. 23 23
804 17.46 temperature 30 30 < th dose dependent rect. 17 23
833 17.48 temperature 25 720 > th dose dependent rect. 15 17
834 17.48 temperature 15 10 > th dose dependent rect. 24 18
848 17.49 radiation 30 90 < th dose dependent rect. 5 8
872 17.50 radiation 1 270 > th dose independent rect. 17 23
880 17.50 temperature 10 270 > th dose dependent rect. 20 19
886 17.51 radiation 1 30 < th dose independent rect. 5 19
907 17.52 temperature 15 10 > th dose dependent sin 19 NA
921 17.53 temperature 10 1440 > th dose independent rect. 10 9
925 17.53 wind 5 270 < th dose independent rect. 14 13
927 17.53 temperature 10 1440 > th dose independent rect. 19 15
932 17.53 atmosphere 995 1440 > th dose independent rect. 19 15
947 17.54 humidity 70 10 > th dose independent rect. 5 19
948 17.54 temperature 25 720 > th dose dependent sin 16 NA
983 17.55 radiation 20 270 < th dose dependent rect. 3 14
993 17.55 temperature 30 30 < th dose dependent rect. 23 23