Os10g0323000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0323000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.8 | 0.318 | 8.33 | -0.382 | 0.353 | 0.608 | -0.653 | 0.525 | 0.349 | 20 | 20.8 | 7040 | -- | -- |
| 46.02 | 0.316 | 8.35 | -0.467 | 0.347 | 0.516 | -0.678 | -- | 0.314 | 19.9 | 21.48 | 8013 | -- | -- |
| 46.87 | 0.319 | 8.33 | -0.381 | 0.346 | 0.624 | -- | 0.516 | 0.342 | 20.1 | 20.7 | 7919 | -- | -- |
| 47.12 | 0.32 | 8.35 | -0.439 | 0.345 | 0.505 | -- | -- | 0.316 | 20.2 | 21.5 | 8013 | -- | -- |
| 53.5 | 0.341 | 8.32 | -0.396 | -- | 0.652 | -- | 0.584 | 0.336 | -- | 20.8 | 7957 | -- | -- |
| 51.71 | 0.337 | 8.31 | -0.0909 | 0.356 | -- | -0.592 | -- | 0.505 | 20.2 | -- | -- | -- | -- |
| 52.75 | 0.34 | 8.31 | -0.0747 | 0.356 | -- | -- | -- | 0.504 | 20.4 | -- | -- | -- | -- |
| 53.75 | 0.341 | 8.35 | -0.485 | -- | 0.538 | -- | -- | 0.307 | -- | 21.1 | 7986 | -- | -- |
| 48.96 | 0.326 | 8.34 | -- | 0.381 | 0.325 | -- | -- | 0.406 | 19.8 | 24.1 | 2742 | -- | -- |
| 59.79 | 0.361 | 8.3 | -0.0767 | -- | -- | -- | -- | 0.501 | -- | -- | -- | -- | -- |
| 52.89 | 0.34 | 8.31 | -- | 0.356 | -- | -- | -- | 0.513 | 20.4 | -- | -- | -- | -- |
| 54.02 | 0.342 | 8.34 | -- | -- | 0.39 | -- | -- | 0.371 | -- | 25.3 | 2091 | -- | -- |
| 59.94 | 0.361 | 8.3 | -- | -- | -- | -- | -- | 0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.54 | temperature | 10 | 90 | > th | dose dependent | rect. | 9 | 21 |
| 6 | 45.79 | temperature | 10 | 30 | > th | dose dependent | rect. | 9 | 10 |
| 8 | 45.92 | humidity | 80 | 30 | < th | dose dependent | rect. | 19 | 14 |
| 10 | 46.13 | temperature | 15 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 12 | 46.22 | humidity | 70 | 90 | < th | dose independent | rect. | 19 | 13 |
| 17 | 46.39 | temperature | 25 | 30 | > th | dose independent | rect. | 9 | 10 |
| 18 | 46.40 | humidity | 90 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 19 | 46.41 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 5 |
| 20 | 46.41 | wind | 1 | 30 | > th | dose independent | rect. | 19 | 14 |
| 29 | 46.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 32 | 46.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 33 | 46.54 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 36 | 46.55 | radiation | 1 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 40 | 46.57 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 9 | 21 |
| 45 | 46.61 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 46 | 46.61 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 55 | 46.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 58 | 46.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 65 | 46.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 70 | 46.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 95 | 46.73 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 19 |
| 109 | 46.75 | temperature | 25 | 4320 | < th | dose dependent | rect. | 8 | 17 |
| 126 | 46.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 12 |
| 154 | 46.78 | temperature | 25 | 4320 | < th | dose dependent | sin | 16 | NA |
| 170 | 46.78 | temperature | 25 | 4320 | < th | dose dependent | rect. | 18 | 20 |
| 181 | 46.79 | wind | 5 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 193 | 46.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 210 | 46.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 22 |
| 223 | 46.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 11 |
| 225 | 46.80 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 306 | 46.83 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 340 | 46.84 | wind | 3 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 397 | 46.86 | wind | 5 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 399 | 46.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 400 | 46.86 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 9 | 10 |
| 439 | 46.87 | temperature | 20 | 4320 | > th | dose independent | sin | 11 | NA |
| 449 | 46.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 462 | 46.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 7 |
| 467 | 46.88 | temperature | 25 | 4320 | < th | dose dependent | sin | 8 | NA |
| 469 | 46.88 | temperature | 25 | 4320 | < th | dose dependent | sin | 3 | NA |
| 499 | 46.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 8 |
| 568 | 46.90 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 619 | 46.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 7 |
| 699 | 46.92 | temperature | 20 | 4320 | < th | dose independent | sin | 10 | NA |
| 702 | 46.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 945 | 46.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 946 | 46.96 | radiation | 10 | 30 | > th | dose independent | rect. | 6 | 3 |