Os10g0322800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os10g0322800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.64 | 0.555 | 4.12 | 0.544 | 0.364 | 1.29 | 0.749 | 0.203 | -0.134 | 9.76 | 22.6 | 1885 | -- | -- |
| 139.57 | 0.55 | 4.11 | 0.623 | 0.376 | 1.31 | 0.787 | -- | -0.118 | 9.75 | 22.41 | 1871 | -- | -- |
| 141.34 | 0.554 | 4.12 | 0.594 | 0.361 | 1.35 | -- | 0.323 | -0.143 | 9.65 | 22.3 | 1928 | -- | -- |
| 141.57 | 0.554 | 4.11 | 0.68 | 0.36 | 1.35 | -- | -- | -0.122 | 9.83 | 22.28 | 1881 | -- | -- |
| 147.59 | 0.566 | 4.12 | 0.575 | -- | 1.35 | -- | 0.289 | -0.107 | -- | 22.51 | 2186 | -- | -- |
| 206.98 | 0.674 | 4.22 | 0.118 | 0.414 | -- | 0.722 | -- | -0.59 | 9.78 | -- | -- | -- | -- |
| 208.97 | 0.677 | 4.21 | 0.146 | 0.411 | -- | -- | -- | -0.589 | 9.83 | -- | -- | -- | -- |
| 147.46 | 0.566 | 4.1 | 0.694 | -- | 1.33 | -- | -- | -0.0171 | -- | 23.14 | 2197 | -- | -- |
| 151.68 | 0.574 | 4.15 | -- | 0.446 | 1.25 | -- | -- | -0.224 | 9.29 | 22.3 | 1499 | -- | -- |
| 219.04 | 0.692 | 4.23 | 0.142 | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
| 209.53 | 0.677 | 4.22 | -- | 0.41 | -- | -- | -- | -0.605 | 9.8 | -- | -- | -- | -- |
| 155.85 | 0.581 | 4.21 | -- | -- | 1.23 | -- | -- | -0.321 | -- | 22.3 | 854 | -- | -- |
| 219.57 | 0.692 | 4.23 | -- | -- | -- | -- | -- | -0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.95 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 136.05 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 7 | 136.76 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 12 | 137.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 13 | 137.87 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 18 | 138.73 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 20 | 138.82 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 22 | 138.96 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 23 | 139.02 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 24 | 139.05 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 28 | 139.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 31 | 139.24 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 39 | 139.41 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 43 | 139.50 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 49 | 139.60 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 51 | 139.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 56 | 139.66 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 123 | 140.18 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 138 | 140.26 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 153 | 140.35 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 199 | 140.61 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 209 | 140.68 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 237 | 140.82 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 304 | 141.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 567 | 142.06 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 625 | 142.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 642 | 142.30 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 650 | 142.35 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 651 | 142.35 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 706 | 142.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 762 | 142.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 799 | 142.90 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 995 | 143.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |