Os10g0322300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0322300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.68 | 0.488 | 7.26 | 1.82 | 2.38 | -1.14 | -0.864 | -6.27 | 0.142 | 18.9 | 20.4 | 351 | -- | -- |
| 117.94 | 0.51 | 7.32 | 1.71 | 2.42 | 1.22 | -0.163 | -- | 0.145 | 18.7 | 20.4 | 351 | -- | -- |
| 109.42 | 0.487 | 7.26 | 1.8 | 2.39 | -1.09 | -- | -6.05 | 0.136 | 18.9 | 20.23 | 339 | -- | -- |
| 113.64 | 0.5 | 7.32 | 1.73 | 2.42 | 1.89 | -- | -- | 0.122 | 18.8 | 18.61 | 213 | -- | -- |
| 340.8 | 0.86 | 7.26 | 1.8 | -- | -2.09 | -- | -4.88 | -0.052 | -- | 51.69 | 444 | -- | -- |
| 128.16 | 0.531 | 7.34 | 1.51 | 2.42 | -- | -0.262 | -- | 0.0599 | 18.9 | -- | -- | -- | -- |
| 128.33 | 0.531 | 7.34 | 1.52 | 2.42 | -- | -- | -- | 0.0592 | 18.9 | -- | -- | -- | -- |
| 356.71 | 0.88 | 7.36 | 0.977 | -- | -2.26 | -- | -- | -0.307 | -- | 81.22 | 447 | -- | -- |
| 186.36 | 0.639 | 7.37 | -- | 2.4 | 0.852 | -- | -- | -0.0987 | 18.9 | 17.49 | 315 | -- | -- |
| 434.12 | 0.974 | 7.29 | 1.46 | -- | -- | -- | -- | 0.0134 | -- | -- | -- | -- | -- |
| 188.92 | 0.643 | 7.37 | -- | 2.4 | -- | -- | -- | -0.11 | 18.9 | -- | -- | -- | -- |
| 379.95 | 0.908 | 7.39 | -- | -- | -2.6 | -- | -- | -0.456 | -- | 99.62 | 459 | -- | -- |
| 490.7 | 1.03 | 7.32 | -- | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.29 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 3 | 106.68 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 6 | 106.80 | wind | 7.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 12 | 106.94 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 13 | 106.95 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 17 | 107.27 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 27 | 107.68 | wind | 7.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 28 | 107.78 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 31 | 107.80 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 33 | 107.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 38 | 107.97 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 48 | 108.17 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 49 | 108.19 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 51 | 108.23 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 55 | 108.27 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 62 | 108.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 7 | 6 |
| 69 | 108.41 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 72 | 108.42 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 78 | 108.47 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 89 | 108.53 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 92 | 108.55 | wind | 7.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 97 | 108.60 | wind | 7.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 112 | 108.68 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 115 | 108.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 137 | 108.80 | temperature | 20.0 | 270 | < th | dose dependent | no | NA | NA |
| 138 | 108.80 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 148 | 108.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 151 | 108.84 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 158 | 108.87 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 165 | 108.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 15 |
| 168 | 108.92 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 188 | 109.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 14 |
| 209 | 109.05 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 211 | 109.05 | temperature | 25.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 220 | 109.08 | wind | 5.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 227 | 109.10 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 15 |
| 238 | 109.15 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 239 | 109.15 | temperature | 15.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 256 | 109.20 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 258 | 109.20 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 11 | 13 |
| 262 | 109.21 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 306 | 109.31 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 336 | 109.36 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 345 | 109.38 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 364 | 109.42 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 400 | 109.53 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 402 | 109.54 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 427 | 109.59 | temperature | 20.0 | 90 | < th | dose dependent | sin | 19 | NA |
| 510 | 109.80 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 546 | 109.88 | wind | 7.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 555 | 109.90 | temperature | 20.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 566 | 109.92 | wind | 7.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 627 | 110.03 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 630 | 110.03 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 631 | 110.03 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 677 | 110.10 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 717 | 110.15 | temperature | 20.0 | 270 | < th | dose independent | sin | 23 | NA |
| 844 | 110.37 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 859 | 110.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 860 | 110.40 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 864 | 110.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 880 | 110.43 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 969 | 110.55 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |