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Os10g0322200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.65 (0.0462) R2 : 0.49
β1 : 2.56 (0.164) R2dD : 0.474 R2D : -0.0232
β2 : 0.868 (0.0824) R2dC : 0.125 R2C : 0.135
β3 : 11.9 (1.23) R2dE : 2.44 R2E : -2.38
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 25.3 (3.05) R2dD*E : 1.73 R2D*E : -1.75
γ1 : 0.93 (0.0763) R2dN8 : 0.237 R2N8 : -0.0344
σ : 0.65
deviance : 194.65
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C
peak time of C : 24
E
wheather : radiation
threshold : 2.679
memory length : 1478
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.97
open length of G : 4.12

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
194.89 0.656 8.64 2.56 0.868 12 -0.166 25.5 0.931 24 2.637 1481 9 4.1
215.13 0.683 8.36 1.66 0.843 1.46 -0.629 -- 1.01 0.505 2.511 1839 9.58 6.4
194.65 0.65 8.65 2.56 0.868 11.9 -- 25.3 0.93 24 2.679 1478 8.97 4.12
210.3 0.675 8.36 1.79 0.886 1.77 -- -- 0.996 0.277 2.528 1882 10.6 5.9
239.29 0.72 8.59 2.47 -- 12.4 -- 26.2 0.954 -- 2.571 1260 9.05 4.06
241.55 0.729 8.42 1.45 0.891 -- -0.283 -- 0.772 24 -- -- -- --
241.9 0.728 8.42 1.46 0.892 -- -- -- 0.773 23.9 -- -- -- --
213.27 0.68 8.37 1.59 -- 2.09 -- -- 0.9 -- 5.301 886 11.6 7.35
266.63 0.761 8.34 -- 0.93 1.71 -- -- 0.932 0.553 9.997 1616 11.2 6.87
291.96 0.798 8.4 1.49 -- -- -- -- 0.785 -- -- -- -- --
298.3 0.808 8.45 -- 0.911 -- -- -- 0.61 0.0277 -- -- -- --
273.46 0.77 8.39 -- -- 1.92 -- -- 0.79 -- 10.16 903 11.9 7.18
350.53 0.874 8.43 -- -- -- -- -- 0.62 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 201.44 radiation 1 1440 > th dose independent rect. 9 4
5 202.49 radiation 1 1440 < th dose independent rect. 9 4
6 202.49 radiation 1 1440 < th dose dependent rect. 9 4
30 204.20 wind 7 4320 > th dose independent rect. 17 2
39 204.52 wind 7 4320 < th dose independent rect. 17 2
46 205.06 wind 7 4320 > th dose dependent rect. 18 1
47 205.10 radiation 1 1440 < th dose dependent rect. 9 8
49 205.22 humidity 70 720 < th dose independent rect. 18 14
50 205.40 radiation 1 1440 < th dose dependent rect. 11 6
60 205.82 wind 7 4320 > th dose independent rect. 15 4
66 206.03 humidity 70 720 < th dose independent rect. 18 2
77 206.05 wind 7 4320 < th dose independent rect. 15 4
80 206.12 humidity 80 720 < th dose dependent rect. 19 2
138 208.90 humidity 70 720 > th dose independent rect. 19 8
180 209.72 temperature 30 720 > th dose dependent rect. 18 1
197 209.92 temperature 30 720 > th dose independent rect. 18 1
224 210.38 humidity 80 720 < th dose dependent rect. 18 13
238 210.47 humidity 70 720 > th dose independent rect. 17 15
280 211.36 humidity 60 720 > th dose dependent rect. 17 7
305 211.50 humidity 70 720 > th dose dependent rect. 19 4
307 211.54 radiation 1 1440 > th dose independent rect. 9 1
311 211.59 radiation 10 1440 < th dose dependent rect. 12 9
326 211.68 radiation 10 1440 < th dose dependent rect. 12 15
377 212.25 wind 1 4320 < th dose independent rect. 6 1
379 212.26 radiation 1 720 > th dose independent rect. 9 10
419 212.43 humidity 80 1440 < th dose independent rect. 5 10
444 212.57 wind 7 4320 > th dose independent rect. 14 14
453 212.63 wind 7 4320 > th dose independent rect. 14 16
470 212.77 radiation 1 720 < th dose independent rect. 11 14
475 212.79 radiation 10 1440 < th dose dependent sin 18 NA
480 212.83 radiation 20 1440 < th dose dependent rect. 11 3
488 212.87 radiation 10 4320 < th dose dependent rect. 21 8
490 212.88 humidity 60 14400 > th dose independent rect. 21 9
493 212.89 humidity 80 720 > th dose independent rect. 19 3
498 212.91 wind 7 4320 < th dose independent rect. 14 16
540 213.17 wind 1 4320 > th dose independent rect. 6 1
545 213.22 radiation 1 1440 < th dose independent rect. 11 10
602 213.44 humidity 70 720 > th dose independent sin 12 NA
626 213.61 humidity 80 1440 > th dose independent rect. 12 2
642 213.62 humidity 80 1440 > th dose independent rect. 6 10
706 213.93 humidity 70 1440 < th dose dependent rect. 15 3
773 214.13 humidity 80 720 > th dose dependent rect. 21 2
778 214.18 temperature 25 720 > th dose dependent rect. 22 1
783 214.22 radiation 20 14400 < th dose independent rect. 21 9
790 214.26 humidity 60 1440 > th dose dependent rect. 12 1
804 214.34 wind 5 1440 < th dose independent rect. 21 1
811 214.36 humidity 70 1440 < th dose dependent rect. 15 17
827 214.45 humidity 70 720 < th dose independent sin 12 NA
828 214.45 humidity 80 1440 < th dose independent rect. 12 2
841 214.52 humidity 80 1440 < th dose independent sin 3 NA
878 214.64 humidity 90 1440 < th dose dependent rect. 12 5
883 214.66 humidity 70 1440 < th dose independent sin 14 NA
885 214.66 radiation 10 4320 < th dose dependent rect. 19 10
920 214.79 radiation 10 4320 < th dose dependent rect. 23 6
945 214.92 humidity 90 1440 < th dose dependent rect. 12 2