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Os10g0320100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0617) R2 : 0.664
β1 : -3.79 (0.252) R2dD : 0.232 R2D : 0.167
β2 : 2.48 (0.148) R2dC : 0.217 R2C : 0.104
β3 : -3.8 (0.192) R2dE : 0.332 R2E : 0.136
β4 : 4.15 (0.585) R2dD*C : 0.0389 R2D*C : -0.00182
β5 : -3.42 (0.791) R2dD*E : 0.0193 R2D*E : 0.0756
γ1 : -0.735 (0.134) R2dN8 : 0.0331 R2N8 : -0.03
σ : 1.12
deviance : 570.38
__
_____
C
peak time of C : 9.75
E
wheather : humidity
threshold : 72
memory length : 1247
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
570.38 1.12 13 -3.79 2.48 -3.8 4.15 -3.42 -0.735 9.75 72 1247 -- --
591.14 1.13 13.1 -4.23 2.7 -3.89 3.71 -- -0.914 9.82 71.03 1213 -- --
632.98 1.17 13 -3.79 2.48 -3.81 -- -2.3 -0.766 9.78 72 1240 -- --
643.87 1.18 13.1 -4.19 2.6 -3.92 -- -- -0.923 9.82 71.01 1213 -- --
862.49 1.37 13 -3.57 -- -3.54 -- -3.38 -0.681 -- 73 1450 -- --
1129.06 1.58 12.9 -3.51 2.02 -- 3.51 -- -0.369 8.54 -- -- -- --
1168.68 1.6 12.9 -3.4 2.01 -- -- -- -0.369 8.52 -- -- -- --
887.77 1.39 13.1 -4.09 -- -3.71 -- -- -0.833 -- 72.16 1437 -- --
1091.2 1.54 13 -- 2.52 -3.33 -- -- -0.447 9.73 72 1204 -- --
1395.69 1.75 13 -3.39 -- -- -- -- -0.35 -- -- -- -- --
1472.84 1.8 12.9 -- 2 -- -- -- 0.00924 8.65 -- -- -- --
1311.69 1.69 13.1 -- -- -3.21 -- -- -0.477 -- 74.15 1456 -- --
1698.63 1.92 12.9 -- -- -- -- -- 0.0259 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 604.92 humidity 50 1440 > th dose dependent rect. 6 17
43 612.21 humidity 90 1440 < th dose dependent rect. 5 18
58 613.43 humidity 80 1440 < th dose independent rect. 7 13
61 613.64 humidity 80 1440 < th dose independent rect. 7 8
70 614.32 humidity 90 1440 < th dose dependent rect. 16 22
119 617.55 humidity 50 1440 > th dose dependent sin 0 NA
148 619.24 humidity 80 1440 > th dose independent rect. 6 15
212 622.89 humidity 70 1440 > th dose independent rect. 18 20
216 623.01 humidity 90 1440 < th dose dependent no NA NA
220 623.34 humidity 70 1440 > th dose independent rect. 14 22
235 623.98 humidity 80 1440 > th dose independent rect. 7 8
258 625.07 humidity 80 1440 < th dose independent sin 1 NA
306 627.95 humidity 90 1440 < th dose dependent rect. 11 23
310 628.14 humidity 90 1440 < th dose dependent sin 0 NA
314 628.28 humidity 70 1440 > th dose independent rect. 8 19
315 628.29 humidity 70 1440 > th dose independent rect. 8 21
316 628.30 humidity 70 1440 > th dose independent rect. 8 17
324 628.36 humidity 50 1440 > th dose dependent rect. 15 23
346 629.15 humidity 50 1440 > th dose dependent no NA NA
362 629.44 humidity 70 1440 > th dose independent rect. 24 21
365 629.45 humidity 70 1440 > th dose independent rect. 2 19
367 629.46 humidity 70 1440 > th dose independent rect. 2 23
383 629.50 humidity 70 1440 > th dose independent rect. 4 23
388 629.52 humidity 70 1440 > th dose independent no NA NA
432 629.86 humidity 60 1440 > th dose dependent rect. 6 9
444 630.19 humidity 80 1440 > th dose independent sin 1 NA
451 630.69 humidity 50 1440 > th dose dependent rect. 13 23
561 635.50 humidity 50 1440 > th dose dependent rect. 11 23
585 636.74 humidity 70 1440 < th dose independent rect. 14 22
703 641.72 humidity 70 1440 > th dose independent sin 22 NA
816 643.72 humidity 70 1440 < th dose independent rect. 17 21