Os10g0318300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0318300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.36 | 0.611 | 3.29 | -0.383 | 0.234 | 1.44 | 0.137 | -16.7 | -0.0546 | 11.7 | 56 | 8 | 7.16 | -- |
| 201.29 | 0.661 | 3.26 | -0.207 | 0.228 | 1.09 | -0.207 | -- | -0.0733 | 12.1 | 46.84 | 13 | 7.16 | -- |
| 169.28 | 0.606 | 3.29 | -0.384 | 0.238 | 1.49 | -- | -17.5 | -0.0552 | 11.8 | 56 | 7 | 6.86 | -- |
| 201.45 | 0.661 | 3.26 | -0.187 | 0.231 | 1.02 | -- | -- | -0.0751 | 11.6 | 46.79 | 18 | 6.99 | -- |
| 172.73 | 0.612 | 3.3 | -0.399 | -- | 1.52 | -- | -17.5 | -0.058 | -- | 55.84 | 7 | 6.87 | -- |
| 202.43 | 0.667 | 3.27 | -0.151 | 0.233 | -- | -0.29 | -- | -0.0739 | 12.7 | -- | -- | -- | -- |
| 202.63 | 0.667 | 3.26 | -0.163 | 0.238 | -- | -- | -- | -0.0766 | 11.8 | -- | -- | -- | -- |
| 204.75 | 0.666 | 3.27 | -0.201 | -- | 1.05 | -- | -- | -0.0769 | -- | 46.63 | 17 | 7.45 | -- |
| 202.39 | 0.663 | 3.26 | -- | 0.23 | 0.956 | -- | -- | -0.0629 | 11.6 | 47 | 18 | 7.15 | -- |
| 206.2 | 0.671 | 3.27 | -0.17 | -- | -- | -- | -- | -0.0796 | -- | -- | -- | -- | -- |
| 203.32 | 0.667 | 3.26 | -- | 0.24 | -- | -- | -- | -0.0584 | 11.8 | -- | -- | -- | -- |
| 205.79 | 0.668 | 3.26 | -- | -- | 0.991 | -- | -- | -0.0573 | -- | 47 | 18 | 7.28 | -- |
| 206.96 | 0.671 | 3.27 | -- | -- | -- | -- | -- | -0.0607 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.93 | radiation | 30 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 17 | 163.09 | radiation | 20 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 47 | 163.12 | radiation | 40 | 90 | > th | dose independent | rect. | 15 | 1 |
| 81 | 163.13 | radiation | 20 | 10 | > th | dose independent | rect. | 16 | 1 |
| 304 | 169.99 | wind | 1 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 306 | 170.42 | humidity | 60 | 10 | < th | dose independent | rect. | 15 | 1 |
| 315 | 172.85 | humidity | 60 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 325 | 174.46 | wind | 3 | 10 | < th | dose independent | rect. | 16 | 1 |
| 347 | 174.85 | wind | 3 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 513 | 177.68 | temperature | 25 | 90 | > th | dose dependent | rect. | 2 | 4 |
| 558 | 178.07 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 562 | 178.17 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 3 | 1 |
| 569 | 178.17 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 630 | 179.42 | humidity | 60 | 10 | < th | dose independent | sin | 13 | NA |
| 632 | 179.49 | temperature | 25 | 90 | > th | dose independent | rect. | 2 | 2 |
| 651 | 179.77 | humidity | 60 | 90 | > th | dose independent | sin | 13 | NA |
| 664 | 179.80 | humidity | 60 | 90 | < th | dose independent | sin | 13 | NA |
| 665 | 179.82 | humidity | 60 | 10 | > th | dose independent | sin | 13 | NA |
| 699 | 180.85 | humidity | 60 | 10 | < th | dose dependent | sin | 13 | NA |
| 720 | 181.23 | temperature | 25 | 10 | > th | dose independent | rect. | 3 | 1 |
| 757 | 181.85 | radiation | 30 | 30 | < th | dose independent | sin | 14 | NA |
| 822 | 182.49 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 827 | 182.66 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 861 | 183.27 | humidity | 60 | 30 | < th | dose dependent | rect. | 12 | 4 |
| 869 | 183.59 | radiation | 20 | 10 | > th | dose independent | sin | 13 | NA |