Os10g0318000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0318000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.76 | 0.289 | 8.27 | -0.235 | 0.413 | -0.173 | -0.0869 | -2.13 | 0.145 | 17.5 | 23.99 | 2555 | -- | -- |
| 43.7 | 0.308 | 8.34 | -0.964 | 0.346 | -0.276 | -0.0981 | -- | -0.0294 | 17.7 | 28.29 | 2202 | -- | -- |
| 37.46 | 0.285 | 8.27 | -0.217 | 0.391 | -0.172 | -- | -2.02 | 0.135 | 17.6 | 23 | 2501 | -- | -- |
| 43.67 | 0.308 | 8.34 | -0.976 | 0.355 | -0.284 | -- | -- | -0.0283 | 17.4 | 28.3 | 2260 | -- | -- |
| 44.85 | 0.312 | 8.28 | -0.257 | -- | -0.179 | -- | -1.97 | 0.113 | -- | 22.7 | 1984 | -- | -- |
| 46.87 | 0.321 | 8.34 | -0.885 | 0.382 | -- | -0.144 | -- | 0.02 | 17.8 | -- | -- | -- | -- |
| 46.91 | 0.321 | 8.34 | -0.885 | 0.382 | -- | -- | -- | 0.0192 | 17.9 | -- | -- | -- | -- |
| 49.44 | 0.327 | 8.33 | -0.966 | -- | -0.324 | -- | -- | -0.0135 | -- | 27.6 | 2022 | -- | -- |
| 67.23 | 0.382 | 8.31 | -- | 0.387 | -0.1 | -- | -- | 0.115 | 17.4 | 28.8 | 2253 | -- | -- |
| 54.46 | 0.345 | 8.33 | -0.896 | -- | -- | -- | -- | 0.0104 | -- | -- | -- | -- | -- |
| 67.54 | 0.384 | 8.32 | -- | 0.395 | -- | -- | -- | 0.118 | 17.8 | -- | -- | -- | -- |
| 74.43 | 0.402 | 8.31 | -- | -- | -0.193 | -- | -- | 0.1 | -- | 29.2 | 2071 | -- | -- |
| 75.65 | 0.406 | 8.31 | -- | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 17 |
| 7 | 37.04 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 11 | 37.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 15 | 37.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 35 | 37.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 36 | 37.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 39 | 37.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 63 | 37.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 125 | 37.65 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 166 | 37.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 379 | 38.03 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 423 | 38.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 425 | 38.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 452 | 38.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 463 | 38.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 479 | 38.14 | temperature | 10 | 4320 | > th | dose dependent | sin | 15 | NA |
| 489 | 38.15 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 491 | 38.15 | temperature | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 508 | 38.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 923 | 38.46 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |