Os10g0213800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0213800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.41 | 0.478 | 12.1 | -1.82 | 0.59 | 1.09 | 1.58 | -19.8 | 0.606 | 5.76 | 30.1 | 14 | -- | -- |
| 105.38 | 0.478 | 12.1 | -1.12 | 0.378 | -0.967 | 1.77 | -- | 0.679 | 5.67 | 26.35 | 168 | -- | -- |
| 109.31 | 0.487 | 12.1 | -1.86 | 0.579 | 1.03 | -- | -20.2 | 0.59 | 6.02 | 29.88 | 19 | -- | -- |
| 108.46 | 0.485 | 12.1 | -1.07 | 0.364 | -1.17 | -- | -- | 0.655 | 7.4 | 26.46 | 138 | -- | -- |
| 122.07 | 0.515 | 12.2 | -2.13 | -- | 0.852 | -- | -20 | 0.557 | -- | 29.59 | 180 | -- | -- |
| 120.86 | 0.515 | 12.1 | -1.24 | 0.693 | -- | 1.9 | -- | 0.643 | 5.43 | -- | -- | -- | -- |
| 129.71 | 0.533 | 12.1 | -1.23 | 0.707 | -- | -- | -- | 0.635 | 5.61 | -- | -- | -- | -- |
| 112.79 | 0.495 | 12.1 | -1.02 | -- | -1.28 | -- | -- | 0.7 | -- | 25.7 | 239 | -- | -- |
| 137.44 | 0.546 | 12 | -- | 0.291 | -1.37 | -- | -- | 0.811 | 8.27 | 25.81 | 171 | -- | -- |
| 155.67 | 0.583 | 12.1 | -1.21 | -- | -- | -- | -- | 0.652 | -- | -- | -- | -- | -- |
| 169.86 | 0.61 | 12 | -- | 0.687 | -- | -- | -- | 0.772 | 5.69 | -- | -- | -- | -- |
| 140.03 | 0.551 | 12 | -- | -- | -1.37 | -- | -- | 0.887 | -- | 24.4 | 257 | -- | -- |
| 194.38 | 0.651 | 12 | -- | -- | -- | -- | -- | 0.786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.50 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 6 | 98.60 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 15 |
| 7 | 99.08 | temperature | 25 | 270 | > th | dose dependent | sin | 3 | NA |
| 9 | 99.16 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 26 | 99.74 | temperature | 30 | 270 | < th | dose independent | sin | 3 | NA |
| 29 | 99.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 32 | 99.85 | temperature | 25 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 50 | 100.20 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 21 |
| 52 | 100.23 | temperature | 30 | 270 | > th | dose independent | sin | 3 | NA |
| 64 | 100.59 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 20 |
| 69 | 100.68 | temperature | 30 | 270 | > th | dose independent | rect. | 9 | 7 |
| 71 | 100.75 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 22 |
| 105 | 101.12 | temperature | 10 | 270 | > th | dose dependent | sin | 1 | NA |
| 154 | 101.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 15 |
| 161 | 101.82 | temperature | 30 | 270 | > th | dose dependent | sin | 7 | NA |
| 204 | 102.20 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 237 | 102.48 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 22 |
| 248 | 102.59 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 8 |
| 249 | 102.59 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 288 | 102.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 307 | 102.81 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 351 | 103.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 353 | 103.03 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 355 | 103.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 386 | 103.07 | temperature | 30 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 475 | 103.23 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 10 |
| 481 | 103.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 539 | 103.33 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 590 | 103.49 | temperature | 30 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 592 | 103.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 594 | 103.53 | temperature | 25 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 599 | 103.54 | temperature | 30 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 612 | 103.60 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 727 | 103.62 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 752 | 103.64 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 928 | 103.75 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 971 | 103.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |